Gene : Glyma.20G117200 G. max Wm82.a2.v1
Genomic Order:  1172 Name:  ? Glyma.20G117200
Secondary Identifier:  ? PAC:30521121
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G117200 0.5kb upstream 0.5kb upstream 1519 true Chr20: 35990274-35991792 Glycine max
Glyma.20G117200 0.5kb upstream 0.5kb upstream 500 false Chr20: 35990274-35990773 Glycine max
Glyma.20G117200 0.5kb downstream 0.5kb downstream 1519 true Chr20: 35990774-35992292 Glycine max
Glyma.20G117200 0.5kb downstream 0.5kb downstream 500 false Chr20: 35991793-35992292 Glycine max
Glyma.20G117200 1.0kb upstream 1.0kb upstream 2019 true Chr20: 35989774-35991792 Glycine max
Glyma.20G117200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 35989774-35990773 Glycine max
Glyma.20G117200 1.0kb downstream 1.0kb downstream 2019 true Chr20: 35990774-35992792 Glycine max
Glyma.20G117200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 35991793-35992792 Glycine max
Glyma.20G117200 2.0kb upstream 2.0kb upstream 3019 true Chr20: 35988774-35991792 Glycine max
Glyma.20G117200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 35988774-35990773 Glycine max
Glyma.20G117200 2.0kb downstream 2.0kb downstream 3019 true Chr20: 35990774-35993792 Glycine max
Glyma.20G117200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 35991793-35993792 Glycine max
Glyma.20G117200 5.0kb upstream 5.0kb upstream 6019 true Chr20: 35985774-35991792 Glycine max
Glyma.20G117200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 35985774-35990773 Glycine max
Glyma.20G117200 5.0kb downstream 5.0kb downstream 6019 true Chr20: 35990774-35996792 Glycine max
Glyma.20G117200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 35991793-35996792 Glycine max
Glyma.20G117200 10.0kb upstream 10.0kb upstream 11019 true Chr20: 35980774-35991792 Glycine max
Glyma.20G117200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 35980774-35990773 Glycine max
Glyma.20G117200 10.0kb downstream 10.0kb downstream 11019 true Chr20: 35990774-36001792 Glycine max
Glyma.20G117200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 35991793-36001792 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299103 5265 Fabidae View MSA
124065676 5270 Rosid View MSA
123746732 5271 Pentapetalae View MSA
122786820 5272 Eudicot View MSA
122047207 5273 Angiosperm View MSA
121310707 5274 Embryophyte View MSA
123348126 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.432349 0.0 1.65479   Low
cufflinks 1.62037 0.0 5.78377    
cufflinks 0.719545 0.0 2.69468    
cufflinks 6.57288 0.0 19.9116   High
cufflinks 2.21299 0.0 7.70357    
cufflinks 0.298563 0.0 1.16159   Low
cufflinks 1.56579 0.0 5.61437    
cufflinks 2.95704 0.0 9.94979    
cufflinks 2.39985 0.0 8.29066    
cufflinks 0.893        
cufflinks 0.148       Low
cufflinks 1.954       High
cufflinks 0.41        
cufflinks 1.308       High
cufflinks 0.405        
cufflinks 0.433        
cufflinks 0.155       Low
cufflinks 1.698       High
cufflinks 1.144       High
cufflinks 0.348        
cufflinks 0.144       Low
cufflinks 0.368        
cufflinks 0.274        
cufflinks 0.171        
cufflinks 0.255        
cufflinks 0.106       Low

0 Strain