Gene : Glyma.20G109900 G. max Wm82.a2.v1
Defline:  (1 of 2) 4.1.1.33 - Diphosphomevalonate decarboxylase / Mevalonate pyrophosphate decarboxylase Genomic Order:  1099
Name:  ? Glyma.20G109900 Secondary Identifier:  ? PAC:30519802
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5910 Glycine max pathologic  
Gmax PWY-922 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G109900 0.5kb upstream 0.5kb upstream 6204 true Chr20: 35222337-35228540 Glycine max
Glyma.20G109900 0.5kb upstream 0.5kb upstream 500 false Chr20: 35222337-35222836 Glycine max
Glyma.20G109900 0.5kb downstream 0.5kb downstream 6204 true Chr20: 35222837-35229040 Glycine max
Glyma.20G109900 0.5kb downstream 0.5kb downstream 500 false Chr20: 35228541-35229040 Glycine max
Glyma.20G109900 1.0kb upstream 1.0kb upstream 6704 true Chr20: 35221837-35228540 Glycine max
Glyma.20G109900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 35221837-35222836 Glycine max
Glyma.20G109900 1.0kb downstream 1.0kb downstream 6704 true Chr20: 35222837-35229540 Glycine max
Glyma.20G109900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 35228541-35229540 Glycine max
Glyma.20G109900 2.0kb upstream 2.0kb upstream 7704 true Chr20: 35220837-35228540 Glycine max
Glyma.20G109900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 35220837-35222836 Glycine max
Glyma.20G109900 2.0kb downstream 2.0kb downstream 7704 true Chr20: 35222837-35230540 Glycine max
Glyma.20G109900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 35228541-35230540 Glycine max
Glyma.20G109900 5.0kb upstream 5.0kb upstream 10704 true Chr20: 35217837-35228540 Glycine max
Glyma.20G109900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 35217837-35222836 Glycine max
Glyma.20G109900 5.0kb downstream 5.0kb downstream 10704 true Chr20: 35222837-35233540 Glycine max
Glyma.20G109900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 35228541-35233540 Glycine max
Glyma.20G109900 10.0kb upstream 10.0kb upstream 15704 true Chr20: 35212837-35228540 Glycine max
Glyma.20G109900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 35212837-35222836 Glycine max
Glyma.20G109900 10.0kb downstream 10.0kb downstream 15704 true Chr20: 35222837-35238540 Glycine max
Glyma.20G109900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 35228541-35238540 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040965 5273 Angiosperm View MSA
122304155 5265 Fabidae View MSA
124066077 5270 Rosid View MSA
123742848 5271 Pentapetalae View MSA
122793764 5272 Eudicot View MSA
121347307 5274 Embryophyte View MSA
123380524 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.5072 0.0 33.441   Low
cufflinks 34.5179 0.0 95.3694 High  
cufflinks 18.3761 0.0 49.1309   Low
cufflinks 31.0364 0.0 85.0821 High  
cufflinks 71.8502 0.0 218.136 High High
cufflinks 42.5997 0.0 120.369 High  
cufflinks 58.942 0.0 173.762 High High
cufflinks 27.6421 0.0 75.1457 High  
cufflinks 35.7767 0.0 99.1992 High  
cufflinks 13.155     High  
cufflinks 1.302       Low
cufflinks 10.839     High  
cufflinks 25.133     High High
cufflinks 31.861     High High
cufflinks 1.363       Low
cufflinks 7.61     High  
cufflinks 4.906        
cufflinks 12.01     High  
cufflinks 23.451     High High
cufflinks 4.7        
cufflinks 2.437       Low
cufflinks 5.659        
cufflinks 16.285     High  
cufflinks 1.728       Low
cufflinks 6.119        
cufflinks 4.246        

0 Strain