Gene : Glyma.20G110200 G. max Wm82.a2.v1
Defline:  (1 of 4) 2.8.1.8 - Lipoyl synthase / Lipoate synthase Genomic Order:  1102
Name:  ? Glyma.20G110200 Secondary Identifier:  ? PAC:30519541
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-501 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G110200 0.5kb upstream 0.5kb upstream 4367 true Chr20: 35235204-35239570 Glycine max
Glyma.20G110200 0.5kb upstream 0.5kb upstream 500 false Chr20: 35239071-35239570 Glycine max
Glyma.20G110200 0.5kb downstream 0.5kb downstream 4367 true Chr20: 35234704-35239070 Glycine max
Glyma.20G110200 0.5kb downstream 0.5kb downstream 500 false Chr20: 35234704-35235203 Glycine max
Glyma.20G110200 1.0kb upstream 1.0kb upstream 4867 true Chr20: 35235204-35240070 Glycine max
Glyma.20G110200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 35239071-35240070 Glycine max
Glyma.20G110200 1.0kb downstream 1.0kb downstream 4867 true Chr20: 35234204-35239070 Glycine max
Glyma.20G110200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 35234204-35235203 Glycine max
Glyma.20G110200 2.0kb upstream 2.0kb upstream 5867 true Chr20: 35235204-35241070 Glycine max
Glyma.20G110200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 35239071-35241070 Glycine max
Glyma.20G110200 2.0kb downstream 2.0kb downstream 5867 true Chr20: 35233204-35239070 Glycine max
Glyma.20G110200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 35233204-35235203 Glycine max
Glyma.20G110200 5.0kb upstream 5.0kb upstream 8867 true Chr20: 35235204-35244070 Glycine max
Glyma.20G110200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 35239071-35244070 Glycine max
Glyma.20G110200 5.0kb downstream 5.0kb downstream 8867 true Chr20: 35230204-35239070 Glycine max
Glyma.20G110200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 35230204-35235203 Glycine max
Glyma.20G110200 10.0kb upstream 10.0kb upstream 13867 true Chr20: 35235204-35249070 Glycine max
Glyma.20G110200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 35239071-35249070 Glycine max
Glyma.20G110200 10.0kb downstream 10.0kb downstream 13867 true Chr20: 35225204-35239070 Glycine max
Glyma.20G110200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 35225204-35235203 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041417 5273 Angiosperm View MSA
122301354 5265 Fabidae View MSA
124063598 5270 Rosid View MSA
123745953 5271 Pentapetalae View MSA
122793471 5272 Eudicot View MSA
121346374 5274 Embryophyte View MSA
123424868 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.18905 0.0 22.3769    
cufflinks 5.54979 0.0 15.708    
cufflinks 3.11554 0.0 9.47805   Low
cufflinks 5.70428 0.0 16.0712    
cufflinks 7.81208 0.0 21.4179    
cufflinks 9.90336 0.0 26.755   High
cufflinks 4.8934 0.0 14.0345    
cufflinks 7.65828 0.0 21.0142    
cufflinks 5.46072 0.0 15.462    
cufflinks 4.666        
cufflinks 1.571       Low
cufflinks 2.295        
cufflinks 5.15       High
cufflinks 5.774       High
cufflinks 1.401       Low
cufflinks 4.717        
cufflinks 2.997        
cufflinks 3.593        
cufflinks 3.501        
cufflinks 4.146        
cufflinks 2.253        
cufflinks 4.402        
cufflinks 5.134       High
cufflinks 2.306        
cufflinks 3.813        
cufflinks 2.716        

0 Strain