Gene : Glyma.20G112800 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG1999 - RNA polymerase II transcription elongation factor DSIF/SUPT5H/SPT5 Genomic Order:  1128
Name:  ? Glyma.20G112800 Secondary Identifier:  ? PAC:30521585
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G112800 0.5kb upstream 0.5kb upstream 8611 true Chr20: 35482559-35491169 Glycine max
Glyma.20G112800 0.5kb upstream 0.5kb upstream 500 false Chr20: 35490670-35491169 Glycine max
Glyma.20G112800 0.5kb downstream 0.5kb downstream 8611 true Chr20: 35482059-35490669 Glycine max
Glyma.20G112800 0.5kb downstream 0.5kb downstream 500 false Chr20: 35482059-35482558 Glycine max
Glyma.20G112800 1.0kb upstream 1.0kb upstream 9111 true Chr20: 35482559-35491669 Glycine max
Glyma.20G112800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 35490670-35491669 Glycine max
Glyma.20G112800 1.0kb downstream 1.0kb downstream 9111 true Chr20: 35481559-35490669 Glycine max
Glyma.20G112800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 35481559-35482558 Glycine max
Glyma.20G112800 2.0kb upstream 2.0kb upstream 10111 true Chr20: 35482559-35492669 Glycine max
Glyma.20G112800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 35490670-35492669 Glycine max
Glyma.20G112800 2.0kb downstream 2.0kb downstream 10111 true Chr20: 35480559-35490669 Glycine max
Glyma.20G112800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 35480559-35482558 Glycine max
Glyma.20G112800 5.0kb upstream 5.0kb upstream 13111 true Chr20: 35482559-35495669 Glycine max
Glyma.20G112800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 35490670-35495669 Glycine max
Glyma.20G112800 5.0kb downstream 5.0kb downstream 13111 true Chr20: 35477559-35490669 Glycine max
Glyma.20G112800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 35477559-35482558 Glycine max
Glyma.20G112800 10.0kb upstream 10.0kb upstream 18111 true Chr20: 35482559-35500669 Glycine max
Glyma.20G112800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 35490670-35500669 Glycine max
Glyma.20G112800 10.0kb downstream 10.0kb downstream 18111 true Chr20: 35472559-35490669 Glycine max
Glyma.20G112800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 35472559-35482558 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312354 5265 Fabidae View MSA
124074331 5270 Rosid View MSA
123745938 5271 Pentapetalae View MSA
122796587 5272 Eudicot View MSA
122051188 5273 Angiosperm View MSA
121344131 5274 Embryophyte View MSA
123426539 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.22925 0.0 25.409    
cufflinks 16.2918 0.0 67.5555    
cufflinks 9.75646 0.0 35.9318    
cufflinks 14.2769 0.0 49.4273    
cufflinks 9.82727 0.0 36.1503    
cufflinks 4.218 0.0 14.3962   Low
cufflinks 30.9029 0.0 141.333 High High
cufflinks 9.22567 0.0 33.4719    
cufflinks 12.9251 0.0 50.3708    
cufflinks 3.789        
cufflinks 1.331       Low
cufflinks 6.815        
cufflinks 2.879        
cufflinks 3.244        
cufflinks 7.011     High  
cufflinks 7.052        
cufflinks 2.584        
cufflinks 7.888     High  
cufflinks 11.089     High High
cufflinks 8.84     High  
cufflinks 1.357       Low
cufflinks 8.726     High  
cufflinks 6.422        
cufflinks 1.082       Low
cufflinks 8.051     High  
cufflinks 3.83        

0 Strain