Gene : Glyma.20G102300 G. max Wm82.a2.v1
Defline:  (1 of 11) PTHR31969:SF1 - GEM-LIKE PROTEIN 4-RELATED Genomic Order:  1023
Name:  ? Glyma.20G102300 Secondary Identifier:  ? PAC:30520694
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G102300 0.5kb upstream 0.5kb upstream 1671 true Chr20: 34522800-34524470 Glycine max
Glyma.20G102300 0.5kb upstream 0.5kb upstream 500 false Chr20: 34522800-34523299 Glycine max
Glyma.20G102300 0.5kb downstream 0.5kb downstream 1671 true Chr20: 34523300-34524970 Glycine max
Glyma.20G102300 0.5kb downstream 0.5kb downstream 500 false Chr20: 34524471-34524970 Glycine max
Glyma.20G102300 1.0kb upstream 1.0kb upstream 2171 true Chr20: 34522300-34524470 Glycine max
Glyma.20G102300 1.0kb upstream 1.0kb upstream 1000 false Chr20: 34522300-34523299 Glycine max
Glyma.20G102300 1.0kb downstream 1.0kb downstream 2171 true Chr20: 34523300-34525470 Glycine max
Glyma.20G102300 1.0kb downstream 1.0kb downstream 1000 false Chr20: 34524471-34525470 Glycine max
Glyma.20G102300 2.0kb upstream 2.0kb upstream 3171 true Chr20: 34521300-34524470 Glycine max
Glyma.20G102300 2.0kb upstream 2.0kb upstream 2000 false Chr20: 34521300-34523299 Glycine max
Glyma.20G102300 2.0kb downstream 2.0kb downstream 3171 true Chr20: 34523300-34526470 Glycine max
Glyma.20G102300 2.0kb downstream 2.0kb downstream 2000 false Chr20: 34524471-34526470 Glycine max
Glyma.20G102300 5.0kb upstream 5.0kb upstream 6171 true Chr20: 34518300-34524470 Glycine max
Glyma.20G102300 5.0kb upstream 5.0kb upstream 5000 false Chr20: 34518300-34523299 Glycine max
Glyma.20G102300 5.0kb downstream 5.0kb downstream 6171 true Chr20: 34523300-34529470 Glycine max
Glyma.20G102300 5.0kb downstream 5.0kb downstream 5000 false Chr20: 34524471-34529470 Glycine max
Glyma.20G102300 10.0kb upstream 10.0kb upstream 11171 true Chr20: 34513300-34524470 Glycine max
Glyma.20G102300 10.0kb upstream 10.0kb upstream 10000 false Chr20: 34513300-34523299 Glycine max
Glyma.20G102300 10.0kb downstream 10.0kb downstream 11171 true Chr20: 34523300-34534470 Glycine max
Glyma.20G102300 10.0kb downstream 10.0kb downstream 10000 false Chr20: 34524471-34534470 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313573 5265 Fabidae View MSA
124071565 5270 Rosid View MSA
123752617 5271 Pentapetalae View MSA
122792535 5272 Eudicot View MSA
122050138 5273 Angiosperm View MSA
121311760 5274 Embryophyte View MSA
123349015 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.22009 0.0 4.47939    
cufflinks 0.926561 0.0 3.44579    
cufflinks 1.53996 0.0 5.55245    
cufflinks 0.265944 0.0 1.04389    
cufflinks 6.75566 0.0 20.8909    
cufflinks 47.0218 0.0 125.69 High High
cufflinks 0.0473727 0.0 0.20403 Low Low
cufflinks 1.64513 0.0 5.9167    
cufflinks 13.7268 0.0 38.5701    
cufflinks 2.54        
cufflinks 151.549     High High
cufflinks 1.754       Low
cufflinks 16.374     High  
cufflinks 15.72     High  
cufflinks 37.097     High  
cufflinks 9.092     High  
cufflinks 38.205     High  
cufflinks 3.591        
cufflinks 1.101       Low
cufflinks 4.597        
cufflinks 136.16     High High
cufflinks 2.996        
cufflinks 1.634       Low
cufflinks 140.184     High High
cufflinks 5.485        
cufflinks 150.03     High High

0 Strain