Gene : Glyma.20G103300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12674 - PREFOLDIN SUBUNIT 5 Genomic Order:  1033
Name:  ? Glyma.20G103300 Secondary Identifier:  ? PAC:30520689
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G103300 0.5kb upstream 0.5kb upstream 2859 true Chr20: 34611068-34613926 Glycine max
Glyma.20G103300 0.5kb upstream 0.5kb upstream 500 false Chr20: 34613427-34613926 Glycine max
Glyma.20G103300 0.5kb downstream 0.5kb downstream 2859 true Chr20: 34610568-34613426 Glycine max
Glyma.20G103300 0.5kb downstream 0.5kb downstream 500 false Chr20: 34610568-34611067 Glycine max
Glyma.20G103300 1.0kb upstream 1.0kb upstream 3359 true Chr20: 34611068-34614426 Glycine max
Glyma.20G103300 1.0kb upstream 1.0kb upstream 1000 false Chr20: 34613427-34614426 Glycine max
Glyma.20G103300 1.0kb downstream 1.0kb downstream 3359 true Chr20: 34610068-34613426 Glycine max
Glyma.20G103300 1.0kb downstream 1.0kb downstream 1000 false Chr20: 34610068-34611067 Glycine max
Glyma.20G103300 2.0kb upstream 2.0kb upstream 4359 true Chr20: 34611068-34615426 Glycine max
Glyma.20G103300 2.0kb upstream 2.0kb upstream 2000 false Chr20: 34613427-34615426 Glycine max
Glyma.20G103300 2.0kb downstream 2.0kb downstream 4359 true Chr20: 34609068-34613426 Glycine max
Glyma.20G103300 2.0kb downstream 2.0kb downstream 2000 false Chr20: 34609068-34611067 Glycine max
Glyma.20G103300 5.0kb upstream 5.0kb upstream 7359 true Chr20: 34611068-34618426 Glycine max
Glyma.20G103300 5.0kb upstream 5.0kb upstream 5000 false Chr20: 34613427-34618426 Glycine max
Glyma.20G103300 5.0kb downstream 5.0kb downstream 7359 true Chr20: 34606068-34613426 Glycine max
Glyma.20G103300 5.0kb downstream 5.0kb downstream 5000 false Chr20: 34606068-34611067 Glycine max
Glyma.20G103300 10.0kb upstream 10.0kb upstream 12359 true Chr20: 34611068-34623426 Glycine max
Glyma.20G103300 10.0kb upstream 10.0kb upstream 10000 false Chr20: 34613427-34623426 Glycine max
Glyma.20G103300 10.0kb downstream 10.0kb downstream 12359 true Chr20: 34601068-34613426 Glycine max
Glyma.20G103300 10.0kb downstream 10.0kb downstream 10000 false Chr20: 34601068-34611067 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304062 5265 Fabidae View MSA
124067703 5270 Rosid View MSA
123739799 5271 Pentapetalae View MSA
122788705 5272 Eudicot View MSA
122043184 5273 Angiosperm View MSA
121347228 5274 Embryophyte View MSA
123424270 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.9907 0.0 72.7445 High  
cufflinks 29.9467 0.0 80.3602 High  
cufflinks 15.7829 0.0 44.3385   Low
cufflinks 25.5261 0.0 68.9826 High  
cufflinks 37.1219 0.0 99.0843 High High
cufflinks 25.4546 0.0 68.7121 High  
cufflinks 22.2952 0.0 60.7289 High  
cufflinks 35.1121 0.0 93.8258 High High
cufflinks 24.6228 0.0 66.6071 High  
cufflinks 9.728     High High
cufflinks 2.151       Low
cufflinks 5.103        
cufflinks 10.636     High High
cufflinks 14.358     High High
cufflinks 2.909       Low
cufflinks 7.07        
cufflinks 3.651        
cufflinks 6.057        
cufflinks 10.585     High High
cufflinks 5.499        
cufflinks 3.19       Low
cufflinks 6.83        
cufflinks 7.978     High  
cufflinks 2.816       Low
cufflinks 6.26        
cufflinks 4.885        

0 Strain