Gene : Glyma.20G103700 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR22763:SF5 - E3 UBIQUITIN-PROTEIN LIGASE CIP8 Genomic Order:  1037
Name:  ? Glyma.20G103700 Secondary Identifier:  ? PAC:30522198
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G103700 0.5kb upstream 0.5kb upstream 3135 true Chr20: 34638080-34641214 Glycine max
Glyma.20G103700 0.5kb upstream 0.5kb upstream 500 false Chr20: 34640715-34641214 Glycine max
Glyma.20G103700 0.5kb downstream 0.5kb downstream 3135 true Chr20: 34637580-34640714 Glycine max
Glyma.20G103700 0.5kb downstream 0.5kb downstream 500 false Chr20: 34637580-34638079 Glycine max
Glyma.20G103700 1.0kb upstream 1.0kb upstream 3635 true Chr20: 34638080-34641714 Glycine max
Glyma.20G103700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 34640715-34641714 Glycine max
Glyma.20G103700 1.0kb downstream 1.0kb downstream 3635 true Chr20: 34637080-34640714 Glycine max
Glyma.20G103700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 34637080-34638079 Glycine max
Glyma.20G103700 2.0kb upstream 2.0kb upstream 4635 true Chr20: 34638080-34642714 Glycine max
Glyma.20G103700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 34640715-34642714 Glycine max
Glyma.20G103700 2.0kb downstream 2.0kb downstream 4635 true Chr20: 34636080-34640714 Glycine max
Glyma.20G103700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 34636080-34638079 Glycine max
Glyma.20G103700 5.0kb upstream 5.0kb upstream 7635 true Chr20: 34638080-34645714 Glycine max
Glyma.20G103700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 34640715-34645714 Glycine max
Glyma.20G103700 5.0kb downstream 5.0kb downstream 7635 true Chr20: 34633080-34640714 Glycine max
Glyma.20G103700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 34633080-34638079 Glycine max
Glyma.20G103700 10.0kb upstream 10.0kb upstream 12635 true Chr20: 34638080-34650714 Glycine max
Glyma.20G103700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 34640715-34650714 Glycine max
Glyma.20G103700 10.0kb downstream 10.0kb downstream 12635 true Chr20: 34628080-34640714 Glycine max
Glyma.20G103700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 34628080-34638079 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296707 5265 Fabidae View MSA
124062824 5270 Rosid View MSA
123753393 5271 Pentapetalae View MSA
122788391 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.0101 0.0 48.2317    
cufflinks 15.685 0.0 42.3123    
cufflinks 20.8956 0.0 55.9024 High High
cufflinks 19.3084 0.0 51.6796    
cufflinks 15.5735 0.0 41.8359    
cufflinks 13.4913 0.0 36.547   Low
cufflinks 17.8336 0.0 47.7656    
cufflinks 19.28 0.0 51.6004    
cufflinks 15.8594 0.0 42.6926    
cufflinks 5.604       Low
cufflinks 9.933     High High
cufflinks 7.929     High  
cufflinks 4.971       Low
cufflinks 5.174       Low
cufflinks 7.041     High  
cufflinks 8.559     High  
cufflinks 8.11     High  
cufflinks 7.238        
cufflinks 8.15     High  
cufflinks 7.92     High  
cufflinks 8.802     High  
cufflinks 7.861     High  
cufflinks 7.329        
cufflinks 9.564     High High
cufflinks 8.012     High  
cufflinks 8.88     High  

0 Strain