Gene : Glyma.20G105800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR20922:SF15 - A_TM021B04.14 PROTEIN Genomic Order:  1058
Name:  ? Glyma.20G105800 Secondary Identifier:  ? PAC:30521638
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G105800 0.5kb upstream 0.5kb upstream 2618 true Chr20: 34829030-34831647 Glycine max
Glyma.20G105800 0.5kb upstream 0.5kb upstream 500 false Chr20: 34829030-34829529 Glycine max
Glyma.20G105800 0.5kb downstream 0.5kb downstream 2618 true Chr20: 34829530-34832147 Glycine max
Glyma.20G105800 0.5kb downstream 0.5kb downstream 500 false Chr20: 34831648-34832147 Glycine max
Glyma.20G105800 1.0kb upstream 1.0kb upstream 3118 true Chr20: 34828530-34831647 Glycine max
Glyma.20G105800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 34828530-34829529 Glycine max
Glyma.20G105800 1.0kb downstream 1.0kb downstream 3118 true Chr20: 34829530-34832647 Glycine max
Glyma.20G105800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 34831648-34832647 Glycine max
Glyma.20G105800 2.0kb upstream 2.0kb upstream 4118 true Chr20: 34827530-34831647 Glycine max
Glyma.20G105800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 34827530-34829529 Glycine max
Glyma.20G105800 2.0kb downstream 2.0kb downstream 4118 true Chr20: 34829530-34833647 Glycine max
Glyma.20G105800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 34831648-34833647 Glycine max
Glyma.20G105800 5.0kb upstream 5.0kb upstream 7118 true Chr20: 34824530-34831647 Glycine max
Glyma.20G105800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 34824530-34829529 Glycine max
Glyma.20G105800 5.0kb downstream 5.0kb downstream 7118 true Chr20: 34829530-34836647 Glycine max
Glyma.20G105800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 34831648-34836647 Glycine max
Glyma.20G105800 10.0kb upstream 10.0kb upstream 12118 true Chr20: 34819530-34831647 Glycine max
Glyma.20G105800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 34819530-34829529 Glycine max
Glyma.20G105800 10.0kb downstream 10.0kb downstream 12118 true Chr20: 34829530-34841647 Glycine max
Glyma.20G105800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 34831648-34841647 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306935 5265 Fabidae View MSA
124065926 5270 Rosid View MSA
123752849 5271 Pentapetalae View MSA
122787585 5272 Eudicot View MSA
122042389 5273 Angiosperm View MSA
121347257 5274 Embryophyte View MSA
123425918 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 71.7976 0.0 195.511 High High
cufflinks 14.6475 0.0 40.9629    
cufflinks 51.379 0.0 137.81 High High
cufflinks 15.1057 0.0 42.0864    
cufflinks 14.5738 0.0 40.7599    
cufflinks 21.0362 0.0 57.1494    
cufflinks 12.0734 0.0 34.4429    
cufflinks 24.4367 0.0 65.8343 High  
cufflinks 17.7664 0.0 48.8045    
cufflinks 4.212       Low
cufflinks 13.641     High  
cufflinks 14.713     High  
cufflinks 3.27       Low
cufflinks 2.752       Low
cufflinks 9.242     High  
cufflinks 13.979     High  
cufflinks 4.986        
cufflinks 7.946     High  
cufflinks 4.908        
cufflinks 22.408     High High
cufflinks 10.302     High  
cufflinks 20.128     High High
cufflinks 8.652     High  
cufflinks 12.106     High  
cufflinks 19.469     High High
cufflinks 8.075     High  

0 Strain