Gene : Glyma.20G106500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR15184//PTHR15184:SF53 - ATP SYNTHASE Genomic Order:  1065
Name:  ? Glyma.20G106500 Secondary Identifier:  ? PAC:30522763
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G106500 0.5kb upstream 0.5kb upstream 7658 true Chr20: 34908876-34916533 Glycine max
Glyma.20G106500 0.5kb upstream 0.5kb upstream 500 false Chr20: 34916034-34916533 Glycine max
Glyma.20G106500 0.5kb downstream 0.5kb downstream 7658 true Chr20: 34908376-34916033 Glycine max
Glyma.20G106500 0.5kb downstream 0.5kb downstream 500 false Chr20: 34908376-34908875 Glycine max
Glyma.20G106500 1.0kb upstream 1.0kb upstream 8158 true Chr20: 34908876-34917033 Glycine max
Glyma.20G106500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 34916034-34917033 Glycine max
Glyma.20G106500 1.0kb downstream 1.0kb downstream 8158 true Chr20: 34907876-34916033 Glycine max
Glyma.20G106500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 34907876-34908875 Glycine max
Glyma.20G106500 2.0kb upstream 2.0kb upstream 9158 true Chr20: 34908876-34918033 Glycine max
Glyma.20G106500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 34916034-34918033 Glycine max
Glyma.20G106500 2.0kb downstream 2.0kb downstream 9158 true Chr20: 34906876-34916033 Glycine max
Glyma.20G106500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 34906876-34908875 Glycine max
Glyma.20G106500 5.0kb upstream 5.0kb upstream 12158 true Chr20: 34908876-34921033 Glycine max
Glyma.20G106500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 34916034-34921033 Glycine max
Glyma.20G106500 5.0kb downstream 5.0kb downstream 12158 true Chr20: 34903876-34916033 Glycine max
Glyma.20G106500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 34903876-34908875 Glycine max
Glyma.20G106500 10.0kb upstream 10.0kb upstream 17158 true Chr20: 34908876-34926033 Glycine max
Glyma.20G106500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 34916034-34926033 Glycine max
Glyma.20G106500 10.0kb downstream 10.0kb downstream 17158 true Chr20: 34898876-34916033 Glycine max
Glyma.20G106500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 34898876-34908875 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310444 5265 Fabidae View MSA
124071392 5270 Rosid View MSA
123743480 5271 Pentapetalae View MSA
122794276 5272 Eudicot View MSA
122046157 5273 Angiosperm View MSA
121350179 5274 Embryophyte View MSA
123423759 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.303 0.0 116.512 High  
cufflinks 33.293 0.0 91.8264 High  
cufflinks 21.1734 0.0 56.8991 High Low
cufflinks 49.8011 0.0 143.744 High  
cufflinks 59.6197 0.0 176.24 High High
cufflinks 56.3186 0.0 165.349 High  
cufflinks 35.0145 0.0 96.9781 High  
cufflinks 61.5169 0.0 182.829 High High
cufflinks 31.5928 0.0 86.84 High  
cufflinks 23.212     High High
cufflinks 2.28       Low
cufflinks 7.259     High  
cufflinks 20.842     High High
cufflinks 21.882     High High
cufflinks 1.346       Low
cufflinks 6.329        
cufflinks 8.567     High  
cufflinks 12.685     High  
cufflinks 10.658     High  
cufflinks 5.352        
cufflinks 4.535        
cufflinks 6.187        
cufflinks 6.604        
cufflinks 3.019       Low
cufflinks 5.742        
cufflinks 8.254     High  

0 Strain