Gene : Glyma.20G106600 G. max Wm82.a2.v1
Defline:  (1 of 7) PF11833 - Protein of unknown function (DUF3353) (DUF3353) Genomic Order:  1066
Name:  ? Glyma.20G106600 Secondary Identifier:  ? PAC:30521502
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G106600 0.5kb upstream 0.5kb upstream 3851 true Chr20: 34919090-34922940 Glycine max
Glyma.20G106600 0.5kb upstream 0.5kb upstream 500 false Chr20: 34919090-34919589 Glycine max
Glyma.20G106600 0.5kb downstream 0.5kb downstream 3851 true Chr20: 34919590-34923440 Glycine max
Glyma.20G106600 0.5kb downstream 0.5kb downstream 500 false Chr20: 34922941-34923440 Glycine max
Glyma.20G106600 1.0kb upstream 1.0kb upstream 4351 true Chr20: 34918590-34922940 Glycine max
Glyma.20G106600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 34918590-34919589 Glycine max
Glyma.20G106600 1.0kb downstream 1.0kb downstream 4351 true Chr20: 34919590-34923940 Glycine max
Glyma.20G106600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 34922941-34923940 Glycine max
Glyma.20G106600 2.0kb upstream 2.0kb upstream 5351 true Chr20: 34917590-34922940 Glycine max
Glyma.20G106600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 34917590-34919589 Glycine max
Glyma.20G106600 2.0kb downstream 2.0kb downstream 5351 true Chr20: 34919590-34924940 Glycine max
Glyma.20G106600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 34922941-34924940 Glycine max
Glyma.20G106600 5.0kb upstream 5.0kb upstream 8351 true Chr20: 34914590-34922940 Glycine max
Glyma.20G106600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 34914590-34919589 Glycine max
Glyma.20G106600 5.0kb downstream 5.0kb downstream 8351 true Chr20: 34919590-34927940 Glycine max
Glyma.20G106600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 34922941-34927940 Glycine max
Glyma.20G106600 10.0kb upstream 10.0kb upstream 13351 true Chr20: 34909590-34922940 Glycine max
Glyma.20G106600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 34909590-34919589 Glycine max
Glyma.20G106600 10.0kb downstream 10.0kb downstream 13351 true Chr20: 34919590-34932940 Glycine max
Glyma.20G106600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 34922941-34932940 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304624 5265 Fabidae View MSA
124066529 5270 Rosid View MSA
123749118 5271 Pentapetalae View MSA
122786274 5272 Eudicot View MSA
122047398 5273 Angiosperm View MSA
121344434 5274 Embryophyte View MSA
123428691 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.5996 0.0 137.479 High High
cufflinks 8.81006 0.0 38.6788    
cufflinks 18.3338 0.0 77.8256    
cufflinks 8.22397 0.0 37.8167    
cufflinks 5.6973 0.0 25.5431    
cufflinks 8.59259 0.0 34.0763    
cufflinks 4.2356 0.0 21.0361   Low
cufflinks 13.4346 0.0 54.1025    
cufflinks 5.32113 0.0 27.3453    
cufflinks 0.392        
cufflinks 0.447        
cufflinks 0.51        
cufflinks 0.219       Low
cufflinks 0.141       Low
cufflinks 0.342        
cufflinks 0.733        
cufflinks 0.243       Low
cufflinks 0.379        
cufflinks 0.411        
cufflinks 0.97       High
cufflinks 0.338        
cufflinks 0.858       High
cufflinks 0.8       High
cufflinks 0.424        
cufflinks 0.849       High
cufflinks 0.245       Low

0 Strain