Gene : Glyma.20G106900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10938//PTHR10938:SF2 - TRANSLATION INITIATION FACTOR IF-3 Genomic Order:  1069
Name:  ? Glyma.20G106900 Secondary Identifier:  ? PAC:30519737
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G106900 0.5kb upstream 0.5kb upstream 6443 true Chr20: 34961543-34967985 Glycine max
Glyma.20G106900 0.5kb upstream 0.5kb upstream 500 false Chr20: 34961543-34962042 Glycine max
Glyma.20G106900 0.5kb downstream 0.5kb downstream 6443 true Chr20: 34962043-34968485 Glycine max
Glyma.20G106900 0.5kb downstream 0.5kb downstream 500 false Chr20: 34967986-34968485 Glycine max
Glyma.20G106900 1.0kb upstream 1.0kb upstream 6943 true Chr20: 34961043-34967985 Glycine max
Glyma.20G106900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 34961043-34962042 Glycine max
Glyma.20G106900 1.0kb downstream 1.0kb downstream 6943 true Chr20: 34962043-34968985 Glycine max
Glyma.20G106900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 34967986-34968985 Glycine max
Glyma.20G106900 2.0kb upstream 2.0kb upstream 7943 true Chr20: 34960043-34967985 Glycine max
Glyma.20G106900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 34960043-34962042 Glycine max
Glyma.20G106900 2.0kb downstream 2.0kb downstream 7943 true Chr20: 34962043-34969985 Glycine max
Glyma.20G106900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 34967986-34969985 Glycine max
Glyma.20G106900 5.0kb upstream 5.0kb upstream 10943 true Chr20: 34957043-34967985 Glycine max
Glyma.20G106900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 34957043-34962042 Glycine max
Glyma.20G106900 5.0kb downstream 5.0kb downstream 10943 true Chr20: 34962043-34972985 Glycine max
Glyma.20G106900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 34967986-34972985 Glycine max
Glyma.20G106900 10.0kb upstream 10.0kb upstream 15943 true Chr20: 34952043-34967985 Glycine max
Glyma.20G106900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 34952043-34962042 Glycine max
Glyma.20G106900 10.0kb downstream 10.0kb downstream 15943 true Chr20: 34962043-34977985 Glycine max
Glyma.20G106900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 34967986-34977985 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122238369 5265 Fabidae Singleton cluster - no MSA
123983806 5270 Rosid Singleton cluster - no MSA
123743196 5271 Pentapetalae View MSA
122770560 5272 Eudicot View MSA
122049946 5273 Angiosperm View MSA
121349179 5274 Embryophyte View MSA
123425847 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.77768 0.0 11.888    
cufflinks 2.60039 0.0 8.60328    
cufflinks 1.38847 0.0 4.89658   Low
cufflinks 3.44503 0.0 10.9425    
cufflinks 3.68359 0.0 11.6427    
cufflinks 3.3662 0.0 10.7786    
cufflinks 6.79635 0.0 19.7167   High
cufflinks 2.28644 0.0 7.67981    
cufflinks 3.21408 0.0 10.341    
cufflinks 0.588       Low
cufflinks 0.499       Low
cufflinks 0.701        
cufflinks 0.971        
cufflinks 1.315       High
cufflinks 0.668        
cufflinks 0.813        
cufflinks 0.595       Low
cufflinks 1.155       High
cufflinks 0.775        
cufflinks 0.806        
cufflinks 0.937        
cufflinks 0.914        
cufflinks 1.081       High
cufflinks 0.583       Low
cufflinks 0.851        
cufflinks 0.638        

0 Strain