Gene : Glyma.20G107700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13264 - GCIP-INTERACTING PROTEIN P29 Genomic Order:  1077
Name:  ? Glyma.20G107700 Secondary Identifier:  ? PAC:30521300
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G107700 0.5kb upstream 0.5kb upstream 3625 true Chr20: 35032914-35036538 Glycine max
Glyma.20G107700 0.5kb upstream 0.5kb upstream 500 false Chr20: 35032914-35033413 Glycine max
Glyma.20G107700 0.5kb downstream 0.5kb downstream 3625 true Chr20: 35033414-35037038 Glycine max
Glyma.20G107700 0.5kb downstream 0.5kb downstream 500 false Chr20: 35036539-35037038 Glycine max
Glyma.20G107700 1.0kb upstream 1.0kb upstream 4125 true Chr20: 35032414-35036538 Glycine max
Glyma.20G107700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 35032414-35033413 Glycine max
Glyma.20G107700 1.0kb downstream 1.0kb downstream 4125 true Chr20: 35033414-35037538 Glycine max
Glyma.20G107700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 35036539-35037538 Glycine max
Glyma.20G107700 2.0kb upstream 2.0kb upstream 5125 true Chr20: 35031414-35036538 Glycine max
Glyma.20G107700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 35031414-35033413 Glycine max
Glyma.20G107700 2.0kb downstream 2.0kb downstream 5125 true Chr20: 35033414-35038538 Glycine max
Glyma.20G107700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 35036539-35038538 Glycine max
Glyma.20G107700 5.0kb upstream 5.0kb upstream 8125 true Chr20: 35028414-35036538 Glycine max
Glyma.20G107700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 35028414-35033413 Glycine max
Glyma.20G107700 5.0kb downstream 5.0kb downstream 8125 true Chr20: 35033414-35041538 Glycine max
Glyma.20G107700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 35036539-35041538 Glycine max
Glyma.20G107700 10.0kb upstream 10.0kb upstream 13125 true Chr20: 35023414-35036538 Glycine max
Glyma.20G107700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 35023414-35033413 Glycine max
Glyma.20G107700 10.0kb downstream 10.0kb downstream 13125 true Chr20: 35033414-35046538 Glycine max
Glyma.20G107700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 35036539-35046538 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300599 5265 Fabidae View MSA
124068841 5270 Rosid View MSA
123740835 5271 Pentapetalae View MSA
122793890 5272 Eudicot View MSA
122049804 5273 Angiosperm View MSA
121347073 5274 Embryophyte View MSA
123424870 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.90948 0.0 29.7937   Low
cufflinks 10.9129 0.0 43.1889    
cufflinks 12.1408 0.0 47.5572    
cufflinks 12.5727 0.0 49.3945    
cufflinks 7.73279 0.0 28.4464   Low
cufflinks 12.7073 0.0 38.2341    
cufflinks 12.3349 0.0 49.0288    
cufflinks 12.5568 0.0 48.9028    
cufflinks 9.09344 0.0 32.4407    
cufflinks 2.046        
cufflinks 2.133        
cufflinks 3.296       High
cufflinks 2.252        
cufflinks 2.253        
cufflinks 1.308       Low
cufflinks 2.422        
cufflinks 1.611       Low
cufflinks 3.021       High
cufflinks 2.405        
cufflinks 2.271        
cufflinks 1.841        
cufflinks 2.549        
cufflinks 2.414        
cufflinks 2.292        
cufflinks 2.542        
cufflinks 1.589       Low

0 Strain