Gene : Glyma.20G142000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10617:SF115 - THIAMINE THIAZOLE SYNTHASE Genomic Order:  1420
Name:  ? Glyma.20G142000 Secondary Identifier:  ? PAC:30521760
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G142000 0.5kb upstream 0.5kb upstream 2565 true Chr20: 38055037-38057601 Glycine max
Glyma.20G142000 0.5kb upstream 0.5kb upstream 500 false Chr20: 38057102-38057601 Glycine max
Glyma.20G142000 0.5kb downstream 0.5kb downstream 2565 true Chr20: 38054537-38057101 Glycine max
Glyma.20G142000 0.5kb downstream 0.5kb downstream 500 false Chr20: 38054537-38055036 Glycine max
Glyma.20G142000 1.0kb upstream 1.0kb upstream 3065 true Chr20: 38055037-38058101 Glycine max
Glyma.20G142000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 38057102-38058101 Glycine max
Glyma.20G142000 1.0kb downstream 1.0kb downstream 3065 true Chr20: 38054037-38057101 Glycine max
Glyma.20G142000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 38054037-38055036 Glycine max
Glyma.20G142000 2.0kb upstream 2.0kb upstream 4065 true Chr20: 38055037-38059101 Glycine max
Glyma.20G142000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 38057102-38059101 Glycine max
Glyma.20G142000 2.0kb downstream 2.0kb downstream 4065 true Chr20: 38053037-38057101 Glycine max
Glyma.20G142000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 38053037-38055036 Glycine max
Glyma.20G142000 5.0kb upstream 5.0kb upstream 7065 true Chr20: 38055037-38062101 Glycine max
Glyma.20G142000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 38057102-38062101 Glycine max
Glyma.20G142000 5.0kb downstream 5.0kb downstream 7065 true Chr20: 38050037-38057101 Glycine max
Glyma.20G142000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 38050037-38055036 Glycine max
Glyma.20G142000 10.0kb upstream 10.0kb upstream 12065 true Chr20: 38055037-38067101 Glycine max
Glyma.20G142000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 38057102-38067101 Glycine max
Glyma.20G142000 10.0kb downstream 10.0kb downstream 12065 true Chr20: 38045037-38057101 Glycine max
Glyma.20G142000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 38045037-38055036 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309348 5265 Fabidae View MSA
124071218 5270 Rosid View MSA
123744490 5271 Pentapetalae View MSA
122793615 5272 Eudicot View MSA
122045282 5273 Angiosperm View MSA
121346380 5274 Embryophyte View MSA
123423990 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 511.259 0.0 2361.11 High High
cufflinks 95.6377 0.0 284.882 High  
cufflinks 74.3191 0.0 212.688 High  
cufflinks 49.0592 0.0 135.183 High  
cufflinks 10.0088 0.0 27.4577    
cufflinks 1.61115 0.0 5.56022   Low
cufflinks 0.128186 0.0 0.506182 Low Low
cufflinks 789.365 0.0 4285.99 High High
cufflinks 16.27 0.0 43.623    
cufflinks 25.371     High  
cufflinks 0.036     Low Low
cufflinks 20.548     High  
cufflinks 0.017     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.697        
cufflinks 42.988     High  
cufflinks 1.768        
cufflinks 29.036     High  
cufflinks 3.785        
cufflinks 111.895     High High
cufflinks 0.022     Low Low
cufflinks 81.714     High High
cufflinks 47.534     High  
cufflinks 0.036     Low Low
cufflinks 54.905     High  
cufflinks 0.127        

0 Strain