Gene : Glyma.20G143800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10026//PTHR10026:SF67 - CYCLIN Genomic Order:  1438
Name:  ? Glyma.20G143800 Secondary Identifier:  ? PAC:30522649
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G143800 0.5kb upstream 0.5kb upstream 7372 true Chr20: 38239556-38246927 Glycine max
Glyma.20G143800 0.5kb upstream 0.5kb upstream 500 false Chr20: 38239556-38240055 Glycine max
Glyma.20G143800 0.5kb downstream 0.5kb downstream 7372 true Chr20: 38240056-38247427 Glycine max
Glyma.20G143800 0.5kb downstream 0.5kb downstream 500 false Chr20: 38246928-38247427 Glycine max
Glyma.20G143800 1.0kb upstream 1.0kb upstream 7872 true Chr20: 38239056-38246927 Glycine max
Glyma.20G143800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 38239056-38240055 Glycine max
Glyma.20G143800 1.0kb downstream 1.0kb downstream 7872 true Chr20: 38240056-38247927 Glycine max
Glyma.20G143800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 38246928-38247927 Glycine max
Glyma.20G143800 2.0kb upstream 2.0kb upstream 8872 true Chr20: 38238056-38246927 Glycine max
Glyma.20G143800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 38238056-38240055 Glycine max
Glyma.20G143800 2.0kb downstream 2.0kb downstream 8872 true Chr20: 38240056-38248927 Glycine max
Glyma.20G143800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 38246928-38248927 Glycine max
Glyma.20G143800 5.0kb upstream 5.0kb upstream 11872 true Chr20: 38235056-38246927 Glycine max
Glyma.20G143800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 38235056-38240055 Glycine max
Glyma.20G143800 5.0kb downstream 5.0kb downstream 11872 true Chr20: 38240056-38251927 Glycine max
Glyma.20G143800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 38246928-38251927 Glycine max
Glyma.20G143800 10.0kb upstream 10.0kb upstream 16872 true Chr20: 38230056-38246927 Glycine max
Glyma.20G143800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 38230056-38240055 Glycine max
Glyma.20G143800 10.0kb downstream 10.0kb downstream 16872 true Chr20: 38240056-38256927 Glycine max
Glyma.20G143800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 38246928-38256927 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305222 5265 Fabidae View MSA
124070762 5270 Rosid View MSA
123742438 5271 Pentapetalae View MSA
122794565 5272 Eudicot View MSA
122048654 5273 Angiosperm View MSA
123429117 5275 Viridiplantae View MSA
121348365 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.1377 0.0 43.2734    
cufflinks 11.8617 0.0 32.2409    
cufflinks 56.0425 0.0 157.467 High High
cufflinks 11.118 0.0 30.3216    
cufflinks 11.0661 0.0 30.2468    
cufflinks 5.5817 0.0 16.341   Low
cufflinks 12.9883 0.0 35.1795    
cufflinks 9.3043 0.0 25.7302    
cufflinks 10.5296 0.0 28.8558    
cufflinks 2.016       Low
cufflinks 4.62        
cufflinks 13.704     High High
cufflinks 2.314       Low
cufflinks 3.157        
cufflinks 4.691        
cufflinks 4.188        
cufflinks 2.223       Low
cufflinks 6.029        
cufflinks 3.933        
cufflinks 4.539        
cufflinks 4.056        
cufflinks 4.774        
cufflinks 3.55        
cufflinks 3.753        
cufflinks 4.438        
cufflinks 3.851        

0 Strain