Gene : Glyma.20G144100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR23500:SF70 - SUGAR TRANSPORT PROTEIN 13 Genomic Order:  1441
Name:  ? Glyma.20G144100 Secondary Identifier:  ? PAC:30520349
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G144100 0.5kb upstream 0.5kb upstream 1886 true Chr20: 38265466-38267351 Glycine max
Glyma.20G144100 0.5kb upstream 0.5kb upstream 500 false Chr20: 38266852-38267351 Glycine max
Glyma.20G144100 0.5kb downstream 0.5kb downstream 1886 true Chr20: 38264966-38266851 Glycine max
Glyma.20G144100 0.5kb downstream 0.5kb downstream 500 false Chr20: 38264966-38265465 Glycine max
Glyma.20G144100 1.0kb upstream 1.0kb upstream 2386 true Chr20: 38265466-38267851 Glycine max
Glyma.20G144100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 38266852-38267851 Glycine max
Glyma.20G144100 1.0kb downstream 1.0kb downstream 2386 true Chr20: 38264466-38266851 Glycine max
Glyma.20G144100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 38264466-38265465 Glycine max
Glyma.20G144100 2.0kb upstream 2.0kb upstream 3386 true Chr20: 38265466-38268851 Glycine max
Glyma.20G144100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 38266852-38268851 Glycine max
Glyma.20G144100 2.0kb downstream 2.0kb downstream 3386 true Chr20: 38263466-38266851 Glycine max
Glyma.20G144100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 38263466-38265465 Glycine max
Glyma.20G144100 5.0kb upstream 5.0kb upstream 6386 true Chr20: 38265466-38271851 Glycine max
Glyma.20G144100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 38266852-38271851 Glycine max
Glyma.20G144100 5.0kb downstream 5.0kb downstream 6386 true Chr20: 38260466-38266851 Glycine max
Glyma.20G144100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 38260466-38265465 Glycine max
Glyma.20G144100 10.0kb upstream 10.0kb upstream 11386 true Chr20: 38265466-38276851 Glycine max
Glyma.20G144100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 38266852-38276851 Glycine max
Glyma.20G144100 10.0kb downstream 10.0kb downstream 11386 true Chr20: 38255466-38266851 Glycine max
Glyma.20G144100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 38255466-38265465 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122238273 5265 Fabidae Singleton cluster - no MSA
124074883 5270 Rosid View MSA
123753472 5271 Pentapetalae View MSA
122797117 5272 Eudicot View MSA
122051255 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121350723 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.94421 0.0 10.2039    
cufflinks 2.44096 0.0 8.59163    
cufflinks 1.62014 0.0 5.86161    
cufflinks 1.1451 0.0 4.23239   Low
cufflinks 5.07922 0.0 16.4599    
cufflinks 6.74011 0.0 20.9907   High
cufflinks 2.69434 0.0 9.40534    
cufflinks 1.56441 0.0 5.67053    
cufflinks 7.83831 0.0 23.8464   High
cufflinks 1.329       Low
cufflinks 4.753        
cufflinks 2.232        
cufflinks 3.935        
cufflinks 4.134        
cufflinks 23.947     High High
cufflinks 3.107        
cufflinks 1.51       Low
cufflinks 2.805        
cufflinks 3.71        
cufflinks 2.581        
cufflinks 3.054        
cufflinks 3.568        
cufflinks 3.197        
cufflinks 2.813        
cufflinks 2.757        
cufflinks 2.525        

0 Strain