Gene : Glyma.20G144800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12725//PTHR12725:SF81 - HALOACID DEHALOGENASE-LIKE HYDROLASE Genomic Order:  1448
Name:  ? Glyma.20G144800 Secondary Identifier:  ? PAC:30520381
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7204 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G144800 0.5kb upstream 0.5kb upstream 2550 true Chr20: 38334461-38337010 Glycine max
Glyma.20G144800 0.5kb upstream 0.5kb upstream 500 false Chr20: 38336511-38337010 Glycine max
Glyma.20G144800 0.5kb downstream 0.5kb downstream 2550 true Chr20: 38333961-38336510 Glycine max
Glyma.20G144800 0.5kb downstream 0.5kb downstream 500 false Chr20: 38333961-38334460 Glycine max
Glyma.20G144800 1.0kb upstream 1.0kb upstream 3050 true Chr20: 38334461-38337510 Glycine max
Glyma.20G144800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 38336511-38337510 Glycine max
Glyma.20G144800 1.0kb downstream 1.0kb downstream 3050 true Chr20: 38333461-38336510 Glycine max
Glyma.20G144800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 38333461-38334460 Glycine max
Glyma.20G144800 2.0kb upstream 2.0kb upstream 4050 true Chr20: 38334461-38338510 Glycine max
Glyma.20G144800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 38336511-38338510 Glycine max
Glyma.20G144800 2.0kb downstream 2.0kb downstream 4050 true Chr20: 38332461-38336510 Glycine max
Glyma.20G144800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 38332461-38334460 Glycine max
Glyma.20G144800 5.0kb upstream 5.0kb upstream 7050 true Chr20: 38334461-38341510 Glycine max
Glyma.20G144800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 38336511-38341510 Glycine max
Glyma.20G144800 5.0kb downstream 5.0kb downstream 7050 true Chr20: 38329461-38336510 Glycine max
Glyma.20G144800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 38329461-38334460 Glycine max
Glyma.20G144800 10.0kb upstream 10.0kb upstream 12050 true Chr20: 38334461-38346510 Glycine max
Glyma.20G144800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 38336511-38346510 Glycine max
Glyma.20G144800 10.0kb downstream 10.0kb downstream 12050 true Chr20: 38324461-38336510 Glycine max
Glyma.20G144800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 38324461-38334460 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309216 5265 Fabidae View MSA
124062962 5270 Rosid View MSA
123740146 5271 Pentapetalae View MSA
122790968 5272 Eudicot View MSA
122048898 5273 Angiosperm View MSA
121311158 5274 Embryophyte View MSA
123426890 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.17324 0.0 54.19    
cufflinks 8.94937 0.0 55.03    
cufflinks 129.515 0.0 795.502 High  
cufflinks 55.7838 0.0 286.034 High  
cufflinks 281.411 0.0 2672.19 High  
cufflinks 343.396 0.0 3551.43 High High
cufflinks 1.98328 0.0 11.2605   Low
cufflinks 23.329 0.0 112.782 High  
cufflinks 549.872 0.0 8377.09 High High
cufflinks 14.279     High  
cufflinks 85.584     High High
cufflinks 35.965     High  
cufflinks 26.11     High  
cufflinks 10.162     High  
cufflinks 256.95     High High
cufflinks 28.269     High  
cufflinks 31.587     High  
cufflinks 7.803     High Low
cufflinks 4.863       Low
cufflinks 40.484     High  
cufflinks 36.574     High  
cufflinks 9.018     High  
cufflinks 5.236       Low
cufflinks 124.45     High High
cufflinks 36.603     High  
cufflinks 69.754     High  

0 Strain