Gene : Glyma.20G146000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21596//PTHR21596:SF11 - RIBONUCLEASE P SUBUNIT P38 Genomic Order:  1460
Name:  ? Glyma.20G146000 Secondary Identifier:  ? PAC:30520266
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G146000 0.5kb upstream 0.5kb upstream 9332 true Chr20: 38442031-38451362 Glycine max
Glyma.20G146000 0.5kb upstream 0.5kb upstream 500 false Chr20: 38442031-38442530 Glycine max
Glyma.20G146000 0.5kb downstream 0.5kb downstream 9332 true Chr20: 38442531-38451862 Glycine max
Glyma.20G146000 0.5kb downstream 0.5kb downstream 500 false Chr20: 38451363-38451862 Glycine max
Glyma.20G146000 1.0kb upstream 1.0kb upstream 9832 true Chr20: 38441531-38451362 Glycine max
Glyma.20G146000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 38441531-38442530 Glycine max
Glyma.20G146000 1.0kb downstream 1.0kb downstream 9832 true Chr20: 38442531-38452362 Glycine max
Glyma.20G146000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 38451363-38452362 Glycine max
Glyma.20G146000 2.0kb upstream 2.0kb upstream 10832 true Chr20: 38440531-38451362 Glycine max
Glyma.20G146000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 38440531-38442530 Glycine max
Glyma.20G146000 2.0kb downstream 2.0kb downstream 10832 true Chr20: 38442531-38453362 Glycine max
Glyma.20G146000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 38451363-38453362 Glycine max
Glyma.20G146000 5.0kb upstream 5.0kb upstream 13832 true Chr20: 38437531-38451362 Glycine max
Glyma.20G146000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 38437531-38442530 Glycine max
Glyma.20G146000 5.0kb downstream 5.0kb downstream 13832 true Chr20: 38442531-38456362 Glycine max
Glyma.20G146000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 38451363-38456362 Glycine max
Glyma.20G146000 10.0kb upstream 10.0kb upstream 18832 true Chr20: 38432531-38451362 Glycine max
Glyma.20G146000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 38432531-38442530 Glycine max
Glyma.20G146000 10.0kb downstream 10.0kb downstream 18832 true Chr20: 38442531-38461362 Glycine max
Glyma.20G146000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 38451363-38461362 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303515 5265 Fabidae View MSA
124063905 5270 Rosid View MSA
123737259 5271 Pentapetalae View MSA
122789928 5272 Eudicot View MSA
122042202 5273 Angiosperm View MSA
121309933 5274 Embryophyte View MSA
123347562 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.34023 0.0 34.5379    
cufflinks 6.40189 0.0 28.2947    
cufflinks 5.38038 0.0 24.8863    
cufflinks 9.10477 0.0 37.7119   High
cufflinks 7.02983 0.0 30.7057    
cufflinks 3.17238 0.0 12.7097   Low
cufflinks 7.67077 0.0 32.6214    
cufflinks 5.53764 0.0 25.9756    
cufflinks 5.78019 0.0 26.0566    
cufflinks 0.374        
cufflinks 0.387        
cufflinks 0.469        
cufflinks 0.419        
cufflinks 0.43        
cufflinks 0.341       Low
cufflinks 0.72       High
cufflinks 0.277       Low
cufflinks 0.598        
cufflinks 0.609        
cufflinks 0.83       High
cufflinks 0.366        
cufflinks 0.658       High
cufflinks 0.527        
cufflinks 0.421        
cufflinks 0.68       High
cufflinks 0.328       Low

0 Strain