Gene : Glyma.20G146100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31791:SF2 - FRIGIDA-LIKE PROTEIN 4A-RELATED Genomic Order:  1461
Name:  ? Glyma.20G146100 Secondary Identifier:  ? PAC:30519979
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G146100 0.5kb upstream 0.5kb upstream 3511 true Chr20: 38457716-38461226 Glycine max
Glyma.20G146100 0.5kb upstream 0.5kb upstream 500 false Chr20: 38457716-38458215 Glycine max
Glyma.20G146100 0.5kb downstream 0.5kb downstream 3511 true Chr20: 38458216-38461726 Glycine max
Glyma.20G146100 0.5kb downstream 0.5kb downstream 500 false Chr20: 38461227-38461726 Glycine max
Glyma.20G146100 1.0kb upstream 1.0kb upstream 4011 true Chr20: 38457216-38461226 Glycine max
Glyma.20G146100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 38457216-38458215 Glycine max
Glyma.20G146100 1.0kb downstream 1.0kb downstream 4011 true Chr20: 38458216-38462226 Glycine max
Glyma.20G146100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 38461227-38462226 Glycine max
Glyma.20G146100 2.0kb upstream 2.0kb upstream 5011 true Chr20: 38456216-38461226 Glycine max
Glyma.20G146100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 38456216-38458215 Glycine max
Glyma.20G146100 2.0kb downstream 2.0kb downstream 5011 true Chr20: 38458216-38463226 Glycine max
Glyma.20G146100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 38461227-38463226 Glycine max
Glyma.20G146100 5.0kb upstream 5.0kb upstream 8011 true Chr20: 38453216-38461226 Glycine max
Glyma.20G146100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 38453216-38458215 Glycine max
Glyma.20G146100 5.0kb downstream 5.0kb downstream 8011 true Chr20: 38458216-38466226 Glycine max
Glyma.20G146100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 38461227-38466226 Glycine max
Glyma.20G146100 10.0kb upstream 10.0kb upstream 13011 true Chr20: 38448216-38461226 Glycine max
Glyma.20G146100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 38448216-38458215 Glycine max
Glyma.20G146100 10.0kb downstream 10.0kb downstream 13011 true Chr20: 38458216-38471226 Glycine max
Glyma.20G146100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 38461227-38471226 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302614 5265 Fabidae View MSA
124064726 5270 Rosid View MSA
123738104 5271 Pentapetalae View MSA
122790313 5272 Eudicot View MSA
122044909 5273 Angiosperm View MSA
121351127 5274 Embryophyte View MSA
123382017 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 144.576 0.0 989.469 High  
cufflinks 162.325 0.0 1177.79 High High
cufflinks 92.1727 0.0 487.93 High  
cufflinks 73.7034 0.0 362.477 High  
cufflinks 86.647 0.0 468.367 High  
cufflinks 37.094 0.0 159.117 High Low
cufflinks 203.761 0.0 1796.11 High High
cufflinks 61.1424 0.0 279.019 High  
cufflinks 68.967 0.0 330.653 High  
cufflinks 21.072     High Low
cufflinks 52.57     High High
cufflinks 27.25     High  
cufflinks 14.644     High Low
cufflinks 18.69     High Low
cufflinks 41.026     High  
cufflinks 48.78     High  
cufflinks 17.639     High Low
cufflinks 28.781     High  
cufflinks 57.514     High High
cufflinks 52.973     High High
cufflinks 37.657     High  
cufflinks 46.042     High  
cufflinks 34.757     High  
cufflinks 52.011     High  
cufflinks 46.111     High  
cufflinks 22.927     High  

0 Strain