Gene : Glyma.20G135900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22844//PTHR22844:SF207 - F-BOX AND WD40 DOMAIN PROTEIN Genomic Order:  1359
Name:  ? Glyma.20G135900 Secondary Identifier:  ? PAC:30522424
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G135900 0.5kb upstream 0.5kb upstream 11094 true Chr20: 37556714-37567807 Glycine max
Glyma.20G135900 0.5kb upstream 0.5kb upstream 500 false Chr20: 37556714-37557213 Glycine max
Glyma.20G135900 0.5kb downstream 0.5kb downstream 11094 true Chr20: 37557214-37568307 Glycine max
Glyma.20G135900 0.5kb downstream 0.5kb downstream 500 false Chr20: 37567808-37568307 Glycine max
Glyma.20G135900 1.0kb upstream 1.0kb upstream 11594 true Chr20: 37556214-37567807 Glycine max
Glyma.20G135900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 37556214-37557213 Glycine max
Glyma.20G135900 1.0kb downstream 1.0kb downstream 11594 true Chr20: 37557214-37568807 Glycine max
Glyma.20G135900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 37567808-37568807 Glycine max
Glyma.20G135900 2.0kb upstream 2.0kb upstream 12594 true Chr20: 37555214-37567807 Glycine max
Glyma.20G135900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 37555214-37557213 Glycine max
Glyma.20G135900 2.0kb downstream 2.0kb downstream 12594 true Chr20: 37557214-37569807 Glycine max
Glyma.20G135900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 37567808-37569807 Glycine max
Glyma.20G135900 5.0kb upstream 5.0kb upstream 15594 true Chr20: 37552214-37567807 Glycine max
Glyma.20G135900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 37552214-37557213 Glycine max
Glyma.20G135900 5.0kb downstream 5.0kb downstream 15594 true Chr20: 37557214-37572807 Glycine max
Glyma.20G135900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 37567808-37572807 Glycine max
Glyma.20G135900 10.0kb upstream 10.0kb upstream 20594 true Chr20: 37547214-37567807 Glycine max
Glyma.20G135900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 37547214-37557213 Glycine max
Glyma.20G135900 10.0kb downstream 10.0kb downstream 20594 true Chr20: 37557214-37577807 Glycine max
Glyma.20G135900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 37567808-37577807 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307584 5265 Fabidae View MSA
124063152 5270 Rosid View MSA
123750980 5271 Pentapetalae View MSA
122788035 5272 Eudicot View MSA
122047475 5273 Angiosperm View MSA
121345803 5274 Embryophyte View MSA
123425228 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.13752 0.0 20.5233    
cufflinks 4.40007 0.0 16.1801    
cufflinks 13.1196 0.0 45.1384   High
cufflinks 5.36849 0.0 18.6546    
cufflinks 5.01323 0.0 17.6783    
cufflinks 4.84659 0.0 17.2406    
cufflinks 5.75141 0.0 20.4516    
cufflinks 5.31024 0.0 18.5363    
cufflinks 5.86015 0.0 21.1549    
cufflinks 0.444       Low
cufflinks 1.473       High
cufflinks 1.376       High
cufflinks 0.431       Low
cufflinks 0.392       Low
cufflinks 1.032        
cufflinks 0.72        
cufflinks 0.932        
cufflinks 0.85        
cufflinks 0.665        
cufflinks 0.628        
cufflinks 0.953        
cufflinks 0.754        
cufflinks 0.572        
cufflinks 1.456       High
cufflinks 0.682        
cufflinks 1.071        

0 Strain