Gene : Glyma.20G136200 G. max Wm82.a2.v1

Defline:  (1 of 2) PTHR11817//PTHR11817:SF21 - PYRUVATE KINASE Genomic Order:  1362
Name:  ? Glyma.20G136200 Secondary Identifier:  ? PAC:30522285

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax ANAGLYCOLYSIS-PWY Glycine max pathologic  
Gmax PWY-1042 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-5723 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G136200 0.5kb upstream 0.5kb upstream 4826 true Chr20: 37580489-37585314 Glycine max
Glyma.20G136200 0.5kb upstream 0.5kb upstream 500 false Chr20: 37584815-37585314 Glycine max
Glyma.20G136200 0.5kb downstream 0.5kb downstream 4826 true Chr20: 37579989-37584814 Glycine max
Glyma.20G136200 0.5kb downstream 0.5kb downstream 500 false Chr20: 37579989-37580488 Glycine max
Glyma.20G136200 1.0kb upstream 1.0kb upstream 5326 true Chr20: 37580489-37585814 Glycine max
Glyma.20G136200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 37584815-37585814 Glycine max
Glyma.20G136200 1.0kb downstream 1.0kb downstream 5326 true Chr20: 37579489-37584814 Glycine max
Glyma.20G136200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 37579489-37580488 Glycine max
Glyma.20G136200 2.0kb upstream 2.0kb upstream 6326 true Chr20: 37580489-37586814 Glycine max
Glyma.20G136200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 37584815-37586814 Glycine max
Glyma.20G136200 2.0kb downstream 2.0kb downstream 6326 true Chr20: 37578489-37584814 Glycine max
Glyma.20G136200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 37578489-37580488 Glycine max
Glyma.20G136200 5.0kb upstream 5.0kb upstream 9326 true Chr20: 37580489-37589814 Glycine max
Glyma.20G136200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 37584815-37589814 Glycine max
Glyma.20G136200 5.0kb downstream 5.0kb downstream 9326 true Chr20: 37575489-37584814 Glycine max
Glyma.20G136200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 37575489-37580488 Glycine max
Glyma.20G136200 10.0kb upstream 10.0kb upstream 14326 true Chr20: 37580489-37594814 Glycine max
Glyma.20G136200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 37584815-37594814 Glycine max
Glyma.20G136200 10.0kb downstream 10.0kb downstream 14326 true Chr20: 37570489-37584814 Glycine max
Glyma.20G136200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 37570489-37580488 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300822 5265 Fabidae View MSA
124069917 5270 Rosid View MSA
123742502 5271 Pentapetalae View MSA
122795154 5272 Eudicot View MSA
122047085 5273 Angiosperm View MSA
121351198 5274 Embryophyte View MSA
123423773 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.75876 0.0 5.63316   Low
cufflinks 13.2127 0.0 35.2502    
cufflinks 3.88778 0.0 11.1359    
cufflinks 11.1787 0.0 29.8589    
cufflinks 5.48631 0.0 15.2135    
cufflinks 5.3423 0.0 14.8303    
cufflinks 28.0005 0.0 76.989 High High
cufflinks 9.70709 0.0 26.0087    
cufflinks 6.23599 0.0 17.0901    
cufflinks 9.402     High High
cufflinks 1.759       Low
cufflinks 3.634        
cufflinks 3.606        
cufflinks 4.959        
cufflinks 2.866       Low
cufflinks 7.875     High  
cufflinks 5.368        
cufflinks 5.846        
cufflinks 11.166     High High
cufflinks 4.028        
cufflinks 2.809       Low
cufflinks 5.713        
cufflinks 9.275     High High
cufflinks 3.19        
cufflinks 6.042        
cufflinks 4.204        

0 Strain