Gene : Glyma.20G135300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11119:SF51 - NUCLEOBASE-ASCORBATE TRANSPORTER 4 Genomic Order:  1353
Name:  ? Glyma.20G135300 Secondary Identifier:  ? PAC:30520446
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G135300 0.5kb upstream 0.5kb upstream 5859 true Chr20: 37474338-37480196 Glycine max
Glyma.20G135300 0.5kb upstream 0.5kb upstream 500 false Chr20: 37474338-37474837 Glycine max
Glyma.20G135300 0.5kb downstream 0.5kb downstream 5859 true Chr20: 37474838-37480696 Glycine max
Glyma.20G135300 0.5kb downstream 0.5kb downstream 500 false Chr20: 37480197-37480696 Glycine max
Glyma.20G135300 1.0kb upstream 1.0kb upstream 6359 true Chr20: 37473838-37480196 Glycine max
Glyma.20G135300 1.0kb upstream 1.0kb upstream 1000 false Chr20: 37473838-37474837 Glycine max
Glyma.20G135300 1.0kb downstream 1.0kb downstream 6359 true Chr20: 37474838-37481196 Glycine max
Glyma.20G135300 1.0kb downstream 1.0kb downstream 1000 false Chr20: 37480197-37481196 Glycine max
Glyma.20G135300 2.0kb upstream 2.0kb upstream 7359 true Chr20: 37472838-37480196 Glycine max
Glyma.20G135300 2.0kb upstream 2.0kb upstream 2000 false Chr20: 37472838-37474837 Glycine max
Glyma.20G135300 2.0kb downstream 2.0kb downstream 7359 true Chr20: 37474838-37482196 Glycine max
Glyma.20G135300 2.0kb downstream 2.0kb downstream 2000 false Chr20: 37480197-37482196 Glycine max
Glyma.20G135300 5.0kb upstream 5.0kb upstream 10359 true Chr20: 37469838-37480196 Glycine max
Glyma.20G135300 5.0kb upstream 5.0kb upstream 5000 false Chr20: 37469838-37474837 Glycine max
Glyma.20G135300 5.0kb downstream 5.0kb downstream 10359 true Chr20: 37474838-37485196 Glycine max
Glyma.20G135300 5.0kb downstream 5.0kb downstream 5000 false Chr20: 37480197-37485196 Glycine max
Glyma.20G135300 10.0kb upstream 10.0kb upstream 15359 true Chr20: 37464838-37480196 Glycine max
Glyma.20G135300 10.0kb upstream 10.0kb upstream 10000 false Chr20: 37464838-37474837 Glycine max
Glyma.20G135300 10.0kb downstream 10.0kb downstream 15359 true Chr20: 37474838-37490196 Glycine max
Glyma.20G135300 10.0kb downstream 10.0kb downstream 10000 false Chr20: 37480197-37490196 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791946 5273 Angiosperm View MSA
122301539 5265 Fabidae View MSA
124069449 5270 Rosid View MSA
123742105 5271 Pentapetalae View MSA
122795516 5272 Eudicot View MSA
121063213 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0357399 0.0 0.147933 Low Low
cufflinks 0.534791 0.0 1.96659    
cufflinks 1.23603 0.0 4.27672    
cufflinks 0.909544 0.0 3.23093    
cufflinks 4.34799 0.0 12.7679   High
cufflinks 1.426 0.0 4.86298    
cufflinks 1.06843 0.0 3.74723    
cufflinks 1.94912 0.0 6.3992    
cufflinks 3.77919 0.0 11.3051    
cufflinks 0.266        
cufflinks 0.516        
cufflinks 0.156        
cufflinks 0.185        
cufflinks 0.092        
cufflinks 0.173        
cufflinks 0.014     Low Low
cufflinks 5.997       High
cufflinks 0.23        
cufflinks 0.254        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.854       High
cufflinks 0.003     Low Low
cufflinks 0.02     Low Low
cufflinks 0.937        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.113       High

0 Strain