Gene : Glyma.20G125700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15970:SF2 - ELL-ASSOCIATED FACTOR EAF Genomic Order:  1257
Name:  ? Glyma.20G125700 Secondary Identifier:  ? PAC:30523017
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G125700 0.5kb upstream 0.5kb upstream 5587 true Chr20: 36787612-36793198 Glycine max
Glyma.20G125700 0.5kb upstream 0.5kb upstream 500 false Chr20: 36787612-36788111 Glycine max
Glyma.20G125700 0.5kb downstream 0.5kb downstream 5587 true Chr20: 36788112-36793698 Glycine max
Glyma.20G125700 0.5kb downstream 0.5kb downstream 500 false Chr20: 36793199-36793698 Glycine max
Glyma.20G125700 1.0kb upstream 1.0kb upstream 6087 true Chr20: 36787112-36793198 Glycine max
Glyma.20G125700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 36787112-36788111 Glycine max
Glyma.20G125700 1.0kb downstream 1.0kb downstream 6087 true Chr20: 36788112-36794198 Glycine max
Glyma.20G125700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 36793199-36794198 Glycine max
Glyma.20G125700 2.0kb upstream 2.0kb upstream 7087 true Chr20: 36786112-36793198 Glycine max
Glyma.20G125700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 36786112-36788111 Glycine max
Glyma.20G125700 2.0kb downstream 2.0kb downstream 7087 true Chr20: 36788112-36795198 Glycine max
Glyma.20G125700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 36793199-36795198 Glycine max
Glyma.20G125700 5.0kb upstream 5.0kb upstream 10087 true Chr20: 36783112-36793198 Glycine max
Glyma.20G125700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 36783112-36788111 Glycine max
Glyma.20G125700 5.0kb downstream 5.0kb downstream 10087 true Chr20: 36788112-36798198 Glycine max
Glyma.20G125700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 36793199-36798198 Glycine max
Glyma.20G125700 10.0kb upstream 10.0kb upstream 15087 true Chr20: 36778112-36793198 Glycine max
Glyma.20G125700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 36778112-36788111 Glycine max
Glyma.20G125700 10.0kb downstream 10.0kb downstream 15087 true Chr20: 36788112-36803198 Glycine max
Glyma.20G125700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 36793199-36803198 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305893 5265 Fabidae View MSA
124060442 5270 Rosid View MSA
123736419 5271 Pentapetalae View MSA
122791922 5272 Eudicot View MSA
122044960 5273 Angiosperm View MSA
121347261 5274 Embryophyte View MSA
123428623 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.2745 0.0 33.1251   Low
cufflinks 12.4554 0.0 33.5842   Low
cufflinks 16.1173 0.0 43.0712    
cufflinks 14.0514 0.0 37.6937    
cufflinks 13.0551 0.0 35.1308    
cufflinks 16.7805 0.0 44.8232   High
cufflinks 16.7762 0.0 44.8362   High
cufflinks 13.5445 0.0 36.3723    
cufflinks 16.007 0.0 42.7944    
cufflinks 3.771        
cufflinks 3.699        
cufflinks 4.865        
cufflinks 4.549        
cufflinks 4.774        
cufflinks 2.426       Low
cufflinks 4.528        
cufflinks 4.479        
cufflinks 4.156        
cufflinks 5.129       High
cufflinks 4.639        
cufflinks 3.193       Low
cufflinks 4.973        
cufflinks 4.193        
cufflinks 5.023        
cufflinks 4.039        
cufflinks 3.506        

0 Strain