Gene : Glyma.20G126000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR15316 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED Genomic Order:  1260
Name:  ? Glyma.20G126000 Secondary Identifier:  ? PAC:30520641
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G126000 0.5kb upstream 0.5kb upstream 4790 true Chr20: 36808196-36812985 Glycine max
Glyma.20G126000 0.5kb upstream 0.5kb upstream 500 false Chr20: 36808196-36808695 Glycine max
Glyma.20G126000 0.5kb downstream 0.5kb downstream 4790 true Chr20: 36808696-36813485 Glycine max
Glyma.20G126000 0.5kb downstream 0.5kb downstream 500 false Chr20: 36812986-36813485 Glycine max
Glyma.20G126000 1.0kb upstream 1.0kb upstream 5290 true Chr20: 36807696-36812985 Glycine max
Glyma.20G126000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 36807696-36808695 Glycine max
Glyma.20G126000 1.0kb downstream 1.0kb downstream 5290 true Chr20: 36808696-36813985 Glycine max
Glyma.20G126000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 36812986-36813985 Glycine max
Glyma.20G126000 2.0kb upstream 2.0kb upstream 6290 true Chr20: 36806696-36812985 Glycine max
Glyma.20G126000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 36806696-36808695 Glycine max
Glyma.20G126000 2.0kb downstream 2.0kb downstream 6290 true Chr20: 36808696-36814985 Glycine max
Glyma.20G126000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 36812986-36814985 Glycine max
Glyma.20G126000 5.0kb upstream 5.0kb upstream 9290 true Chr20: 36803696-36812985 Glycine max
Glyma.20G126000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 36803696-36808695 Glycine max
Glyma.20G126000 5.0kb downstream 5.0kb downstream 9290 true Chr20: 36808696-36817985 Glycine max
Glyma.20G126000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 36812986-36817985 Glycine max
Glyma.20G126000 10.0kb upstream 10.0kb upstream 14290 true Chr20: 36798696-36812985 Glycine max
Glyma.20G126000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 36798696-36808695 Glycine max
Glyma.20G126000 10.0kb downstream 10.0kb downstream 14290 true Chr20: 36808696-36822985 Glycine max
Glyma.20G126000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 36812986-36822985 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041332 5273 Angiosperm View MSA
122301148 5265 Fabidae View MSA
124066763 5270 Rosid View MSA
123748218 5271 Pentapetalae View MSA
122792189 5272 Eudicot View MSA
121344762 5274 Embryophyte View MSA
123425409 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.45617 0.0 23.935   High
cufflinks 6.15715 0.0 20.0283    
cufflinks 4.80729 0.0 16.3507    
cufflinks 5.34851 0.0 17.0456    
cufflinks 5.26533 0.0 16.8357    
cufflinks 1.96619 0.0 7.64422   Low
cufflinks 6.67961 0.0 21.2585    
cufflinks 5.7801 0.0 18.4131    
cufflinks 4.21071 0.0 14.3801    
cufflinks 1.795        
cufflinks 1.142       Low
cufflinks 3.405        
cufflinks 1.869        
cufflinks 2.831        
cufflinks 1.84        
cufflinks 5.235       High
cufflinks 0.783       Low
cufflinks 5.115       High
cufflinks 4.104        
cufflinks 5.456       High
cufflinks 1.346        
cufflinks 5.44       High
cufflinks 4.694        
cufflinks 1.362        
cufflinks 5.38       High
cufflinks 1.236       Low

0 Strain