Gene : Glyma.20G126400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR19856 - WD-REPEATCONTAINING PROTEIN WDR1 Genomic Order:  1264
Name:  ? Glyma.20G126400 Secondary Identifier:  ? PAC:30520877
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G126400 0.5kb upstream 0.5kb upstream 9185 true Chr20: 36854914-36864098 Glycine max
Glyma.20G126400 0.5kb upstream 0.5kb upstream 500 false Chr20: 36863599-36864098 Glycine max
Glyma.20G126400 0.5kb downstream 0.5kb downstream 9185 true Chr20: 36854414-36863598 Glycine max
Glyma.20G126400 0.5kb downstream 0.5kb downstream 500 false Chr20: 36854414-36854913 Glycine max
Glyma.20G126400 1.0kb upstream 1.0kb upstream 9685 true Chr20: 36854914-36864598 Glycine max
Glyma.20G126400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 36863599-36864598 Glycine max
Glyma.20G126400 1.0kb downstream 1.0kb downstream 9685 true Chr20: 36853914-36863598 Glycine max
Glyma.20G126400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 36853914-36854913 Glycine max
Glyma.20G126400 2.0kb upstream 2.0kb upstream 10685 true Chr20: 36854914-36865598 Glycine max
Glyma.20G126400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 36863599-36865598 Glycine max
Glyma.20G126400 2.0kb downstream 2.0kb downstream 10685 true Chr20: 36852914-36863598 Glycine max
Glyma.20G126400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 36852914-36854913 Glycine max
Glyma.20G126400 5.0kb upstream 5.0kb upstream 13685 true Chr20: 36854914-36868598 Glycine max
Glyma.20G126400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 36863599-36868598 Glycine max
Glyma.20G126400 5.0kb downstream 5.0kb downstream 13685 true Chr20: 36849914-36863598 Glycine max
Glyma.20G126400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 36849914-36854913 Glycine max
Glyma.20G126400 10.0kb upstream 10.0kb upstream 18685 true Chr20: 36854914-36873598 Glycine max
Glyma.20G126400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 36863599-36873598 Glycine max
Glyma.20G126400 10.0kb downstream 10.0kb downstream 18685 true Chr20: 36844914-36863598 Glycine max
Glyma.20G126400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 36844914-36854913 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296513 5265 Fabidae View MSA
124037308 5270 Rosid View MSA
123741573 5271 Pentapetalae View MSA
122790877 5272 Eudicot View MSA
122044003 5273 Angiosperm View MSA
121344306 5274 Embryophyte View MSA
123425360 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.625492 0.0 57.2603    
cufflinks 0.468878 0.0 16.9242    
cufflinks 0.673117 0.0 24.2329    
cufflinks 1.29411 0.0 26.8752   High
cufflinks 0.259144 0.0 13.747    
cufflinks 0.116418 0.0 1.05638 Low Low
cufflinks 0.283216 0.0 4.1699    
cufflinks 2.21927 0.0 83.8718   High
cufflinks 0.232661 0.0 2.40119 Low  
cufflinks 0.312       High
cufflinks 0.016     Low  
cufflinks 0.197        
cufflinks 0.036     Low  
cufflinks 0.035     Low  
cufflinks 0.002     Low Low
cufflinks 0.16        
cufflinks 0.08        
cufflinks 0.859       High
cufflinks 0.172        
cufflinks 0.103        
cufflinks 0.012     Low Low
cufflinks 0.113        
cufflinks 0.227        
cufflinks 0.021     Low  
cufflinks 0.103        
cufflinks 0.017     Low  

0 Strain