Gene : Glyma.20G126700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10177:SF251 - CYCLIN-D3-1 Genomic Order:  1267
Name:  ? Glyma.20G126700 Secondary Identifier:  ? PAC:30520551
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G126700 0.5kb upstream 0.5kb upstream 3227 true Chr20: 36883948-36887174 Glycine max
Glyma.20G126700 0.5kb upstream 0.5kb upstream 500 false Chr20: 36883948-36884447 Glycine max
Glyma.20G126700 0.5kb downstream 0.5kb downstream 3227 true Chr20: 36884448-36887674 Glycine max
Glyma.20G126700 0.5kb downstream 0.5kb downstream 500 false Chr20: 36887175-36887674 Glycine max
Glyma.20G126700 1.0kb upstream 1.0kb upstream 3727 true Chr20: 36883448-36887174 Glycine max
Glyma.20G126700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 36883448-36884447 Glycine max
Glyma.20G126700 1.0kb downstream 1.0kb downstream 3727 true Chr20: 36884448-36888174 Glycine max
Glyma.20G126700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 36887175-36888174 Glycine max
Glyma.20G126700 2.0kb upstream 2.0kb upstream 4727 true Chr20: 36882448-36887174 Glycine max
Glyma.20G126700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 36882448-36884447 Glycine max
Glyma.20G126700 2.0kb downstream 2.0kb downstream 4727 true Chr20: 36884448-36889174 Glycine max
Glyma.20G126700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 36887175-36889174 Glycine max
Glyma.20G126700 5.0kb upstream 5.0kb upstream 7727 true Chr20: 36879448-36887174 Glycine max
Glyma.20G126700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 36879448-36884447 Glycine max
Glyma.20G126700 5.0kb downstream 5.0kb downstream 7727 true Chr20: 36884448-36892174 Glycine max
Glyma.20G126700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 36887175-36892174 Glycine max
Glyma.20G126700 10.0kb upstream 10.0kb upstream 12727 true Chr20: 36874448-36887174 Glycine max
Glyma.20G126700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 36874448-36884447 Glycine max
Glyma.20G126700 10.0kb downstream 10.0kb downstream 12727 true Chr20: 36884448-36897174 Glycine max
Glyma.20G126700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 36887175-36897174 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051916 5273 Angiosperm View MSA
122305644 5265 Fabidae View MSA
124071465 5270 Rosid View MSA
123745263 5271 Pentapetalae View MSA
122796369 5272 Eudicot View MSA
121312796 5274 Embryophyte View MSA
123428428 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.37937 0.0 4.68278   Low
cufflinks 61.0378 0.0 180.029 High High
cufflinks 4.30561 0.0 12.4454    
cufflinks 5.42998 0.0 15.3038    
cufflinks 11.52 0.0 30.9056    
cufflinks 26.4655 0.0 71.5586 High  
cufflinks 14.1344 0.0 37.7403    
cufflinks 37.8387 0.0 105.556 High High
cufflinks 12.7657 0.0 34.1349    
cufflinks 7.259        
cufflinks 0.484       Low
cufflinks 10.365     High  
cufflinks 7.27     High  
cufflinks 3.645        
cufflinks 0.559       Low
cufflinks 32.573     High High
cufflinks 2.42        
cufflinks 6.43        
cufflinks 39.704     High High
cufflinks 21.828     High  
cufflinks 0.968       Low
cufflinks 32.559     High High
cufflinks 64.538     High High
cufflinks 0.402       Low
cufflinks 23.642     High  
cufflinks 1.786        

0 Strain