Gene : Glyma.20G127500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR14154//PTHR14154:SF18 - UPF0041 BRAIN PROTEIN 44-RELATED Genomic Order:  1275
Name:  ? Glyma.20G127500 Secondary Identifier:  ? PAC:30523203
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G127500 0.5kb upstream 0.5kb upstream 3358 true Chr20: 36948588-36951945 Glycine max
Glyma.20G127500 0.5kb upstream 0.5kb upstream 500 false Chr20: 36951446-36951945 Glycine max
Glyma.20G127500 0.5kb downstream 0.5kb downstream 3358 true Chr20: 36948088-36951445 Glycine max
Glyma.20G127500 0.5kb downstream 0.5kb downstream 500 false Chr20: 36948088-36948587 Glycine max
Glyma.20G127500 1.0kb upstream 1.0kb upstream 3858 true Chr20: 36948588-36952445 Glycine max
Glyma.20G127500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 36951446-36952445 Glycine max
Glyma.20G127500 1.0kb downstream 1.0kb downstream 3858 true Chr20: 36947588-36951445 Glycine max
Glyma.20G127500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 36947588-36948587 Glycine max
Glyma.20G127500 2.0kb upstream 2.0kb upstream 4858 true Chr20: 36948588-36953445 Glycine max
Glyma.20G127500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 36951446-36953445 Glycine max
Glyma.20G127500 2.0kb downstream 2.0kb downstream 4858 true Chr20: 36946588-36951445 Glycine max
Glyma.20G127500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 36946588-36948587 Glycine max
Glyma.20G127500 5.0kb upstream 5.0kb upstream 7858 true Chr20: 36948588-36956445 Glycine max
Glyma.20G127500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 36951446-36956445 Glycine max
Glyma.20G127500 5.0kb downstream 5.0kb downstream 7858 true Chr20: 36943588-36951445 Glycine max
Glyma.20G127500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 36943588-36948587 Glycine max
Glyma.20G127500 10.0kb upstream 10.0kb upstream 12858 true Chr20: 36948588-36961445 Glycine max
Glyma.20G127500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 36951446-36961445 Glycine max
Glyma.20G127500 10.0kb downstream 10.0kb downstream 12858 true Chr20: 36938588-36951445 Glycine max
Glyma.20G127500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 36938588-36948587 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027604 5273 Angiosperm View MSA
122250210 5265 Fabidae View MSA
124050274 5270 Rosid View MSA
123738865 5271 Pentapetalae View MSA
122786558 5272 Eudicot View MSA
121350548 5274 Embryophyte View MSA
123381785 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.6537 0.0 63.3958   High
cufflinks 10.1987 0.0 37.8655   High
cufflinks 3.42682 0.0 17.7303    
cufflinks 3.60117 0.0 18.3473    
cufflinks 1.04791 0.0 6.6063   Low
cufflinks 1.25348 0.0 7.75042   Low
cufflinks 4.75732 0.0 22.4779    
cufflinks 3.59928 0.0 18.3119    
cufflinks 1.20052 0.0 7.42779   Low
cufflinks 0.579        
cufflinks 0.113        
cufflinks 0.652        
cufflinks 0.088     Low Low
cufflinks 0.086       Low
cufflinks 0.205        
cufflinks 4.214       High
cufflinks 0.08       Low
cufflinks 0.602        
cufflinks 1.274        
cufflinks 4.795       High
cufflinks 0.089       Low
cufflinks 4.389       High
cufflinks 3.474       High
cufflinks 0.108        
cufflinks 4.751       High
cufflinks 0.105        

0 Strain