Gene : Glyma.20G129000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10783//PTHR10783:SF47 - XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED Genomic Order:  1290
Name:  ? Glyma.20G129000 Secondary Identifier:  ? PAC:30521998
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G129000 0.5kb upstream 0.5kb upstream 2336 true Chr20: 37037818-37040153 Glycine max
Glyma.20G129000 0.5kb upstream 0.5kb upstream 500 false Chr20: 37037818-37038317 Glycine max
Glyma.20G129000 0.5kb downstream 0.5kb downstream 2336 true Chr20: 37038318-37040653 Glycine max
Glyma.20G129000 0.5kb downstream 0.5kb downstream 500 false Chr20: 37040154-37040653 Glycine max
Glyma.20G129000 1.0kb upstream 1.0kb upstream 2836 true Chr20: 37037318-37040153 Glycine max
Glyma.20G129000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 37037318-37038317 Glycine max
Glyma.20G129000 1.0kb downstream 1.0kb downstream 2836 true Chr20: 37038318-37041153 Glycine max
Glyma.20G129000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 37040154-37041153 Glycine max
Glyma.20G129000 2.0kb upstream 2.0kb upstream 3836 true Chr20: 37036318-37040153 Glycine max
Glyma.20G129000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 37036318-37038317 Glycine max
Glyma.20G129000 2.0kb downstream 2.0kb downstream 3836 true Chr20: 37038318-37042153 Glycine max
Glyma.20G129000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 37040154-37042153 Glycine max
Glyma.20G129000 5.0kb upstream 5.0kb upstream 6836 true Chr20: 37033318-37040153 Glycine max
Glyma.20G129000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 37033318-37038317 Glycine max
Glyma.20G129000 5.0kb downstream 5.0kb downstream 6836 true Chr20: 37038318-37045153 Glycine max
Glyma.20G129000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 37040154-37045153 Glycine max
Glyma.20G129000 10.0kb upstream 10.0kb upstream 11836 true Chr20: 37028318-37040153 Glycine max
Glyma.20G129000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 37028318-37038317 Glycine max
Glyma.20G129000 10.0kb downstream 10.0kb downstream 11836 true Chr20: 37038318-37050153 Glycine max
Glyma.20G129000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 37040154-37050153 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780072 5273 Angiosperm View MSA
122298419 5265 Fabidae View MSA
124072078 5270 Rosid View MSA
123744974 5271 Pentapetalae View MSA
122771322 5272 Eudicot View MSA
121351061 5274 Embryophyte View MSA
123427814 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0986937 0.0 0.398 Low  
cufflinks 0.205337 0.0 0.805028 Low  
cufflinks 0.825128 0.0 3.03545   High
cufflinks 0.301893 0.0 1.16502    
cufflinks 0.0509928 0.0 0.213397 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.672586 0.0 2.51065    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.147       High
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.453       High
cufflinks 0.012     Low  
cufflinks 0.019     Low  
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain