Gene : Glyma.20G129400 G. max Wm82.a2.v1
Defline:  (1 of 5) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase Genomic Order:  1294
Name:  ? Glyma.20G129400 Secondary Identifier:  ? PAC:30521861
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax SER-GLYSYN-PWY Glycine max pathologic  
Gmax SERSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G129400 0.5kb upstream 0.5kb upstream 3736 true Chr20: 37060738-37064473 Glycine max
Glyma.20G129400 0.5kb upstream 0.5kb upstream 500 false Chr20: 37060738-37061237 Glycine max
Glyma.20G129400 0.5kb downstream 0.5kb downstream 3736 true Chr20: 37061238-37064973 Glycine max
Glyma.20G129400 0.5kb downstream 0.5kb downstream 500 false Chr20: 37064474-37064973 Glycine max
Glyma.20G129400 1.0kb upstream 1.0kb upstream 4236 true Chr20: 37060238-37064473 Glycine max
Glyma.20G129400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 37060238-37061237 Glycine max
Glyma.20G129400 1.0kb downstream 1.0kb downstream 4236 true Chr20: 37061238-37065473 Glycine max
Glyma.20G129400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 37064474-37065473 Glycine max
Glyma.20G129400 2.0kb upstream 2.0kb upstream 5236 true Chr20: 37059238-37064473 Glycine max
Glyma.20G129400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 37059238-37061237 Glycine max
Glyma.20G129400 2.0kb downstream 2.0kb downstream 5236 true Chr20: 37061238-37066473 Glycine max
Glyma.20G129400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 37064474-37066473 Glycine max
Glyma.20G129400 5.0kb upstream 5.0kb upstream 8236 true Chr20: 37056238-37064473 Glycine max
Glyma.20G129400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 37056238-37061237 Glycine max
Glyma.20G129400 5.0kb downstream 5.0kb downstream 8236 true Chr20: 37061238-37069473 Glycine max
Glyma.20G129400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 37064474-37069473 Glycine max
Glyma.20G129400 10.0kb upstream 10.0kb upstream 13236 true Chr20: 37051238-37064473 Glycine max
Glyma.20G129400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 37051238-37061237 Glycine max
Glyma.20G129400 10.0kb downstream 10.0kb downstream 13236 true Chr20: 37061238-37074473 Glycine max
Glyma.20G129400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 37064474-37074473 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305922 5265 Fabidae View MSA
124071894 5270 Rosid View MSA
123750282 5271 Pentapetalae View MSA
122795023 5272 Eudicot View MSA
122044765 5273 Angiosperm View MSA
121347094 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.7095 0.0 36.5756    
cufflinks 11.9748 0.0 31.9969    
cufflinks 3.02899 0.0 9.11474   Low
cufflinks 10.6203 0.0 28.4571    
cufflinks 19.7996 0.0 53.2401   High
cufflinks 5.26845 0.0 14.7315   Low
cufflinks 10.7046 0.0 28.641    
cufflinks 10.3129 0.0 27.6472    
cufflinks 11.2853 0.0 30.1718    
cufflinks 4.837        
cufflinks 1.425       Low
cufflinks 4.79        
cufflinks 10.558     High High
cufflinks 14.404     High High
cufflinks 3.443        
cufflinks 5.011        
cufflinks 3.426        
cufflinks 3.762        
cufflinks 9.154     High High
cufflinks 2.111       Low
cufflinks 4.251        
cufflinks 2.776        
cufflinks 5.71        
cufflinks 1.247       Low
cufflinks 3.165        
cufflinks 6.139        

0 Strain