Gene : Glyma.20G130500 G. max Wm82.a2.v1
Genomic Order:  1305 Name:  ? Glyma.20G130500
Secondary Identifier:  ? PAC:30522753
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G130500 0.5kb upstream 0.5kb upstream 3505 true Chr20: 37136143-37139647 Glycine max
Glyma.20G130500 0.5kb upstream 0.5kb upstream 500 false Chr20: 37136143-37136642 Glycine max
Glyma.20G130500 0.5kb downstream 0.5kb downstream 3505 true Chr20: 37136643-37140147 Glycine max
Glyma.20G130500 0.5kb downstream 0.5kb downstream 500 false Chr20: 37139648-37140147 Glycine max
Glyma.20G130500 1.0kb upstream 1.0kb upstream 4005 true Chr20: 37135643-37139647 Glycine max
Glyma.20G130500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 37135643-37136642 Glycine max
Glyma.20G130500 1.0kb downstream 1.0kb downstream 4005 true Chr20: 37136643-37140647 Glycine max
Glyma.20G130500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 37139648-37140647 Glycine max
Glyma.20G130500 2.0kb upstream 2.0kb upstream 5005 true Chr20: 37134643-37139647 Glycine max
Glyma.20G130500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 37134643-37136642 Glycine max
Glyma.20G130500 2.0kb downstream 2.0kb downstream 5005 true Chr20: 37136643-37141647 Glycine max
Glyma.20G130500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 37139648-37141647 Glycine max
Glyma.20G130500 5.0kb upstream 5.0kb upstream 8005 true Chr20: 37131643-37139647 Glycine max
Glyma.20G130500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 37131643-37136642 Glycine max
Glyma.20G130500 5.0kb downstream 5.0kb downstream 8005 true Chr20: 37136643-37144647 Glycine max
Glyma.20G130500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 37139648-37144647 Glycine max
Glyma.20G130500 10.0kb upstream 10.0kb upstream 13005 true Chr20: 37126643-37139647 Glycine max
Glyma.20G130500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 37126643-37136642 Glycine max
Glyma.20G130500 10.0kb downstream 10.0kb downstream 13005 true Chr20: 37136643-37149647 Glycine max
Glyma.20G130500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 37139648-37149647 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312320 5265 Fabidae View MSA
124073761 5270 Rosid View MSA
123742798 5271 Pentapetalae View MSA
122793453 5272 Eudicot View MSA
122048539 5273 Angiosperm View MSA
121350224 5274 Embryophyte View MSA
123381631 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.0889 0.0 142.256    
cufflinks 23.308 0.0 124.197 High  
cufflinks 9.13412 0.0 83.4506   Low
cufflinks 19.8763 0.0 111.391 High  
cufflinks 35.9762 0.0 176.352 High High
cufflinks 12.5371 0.0 73.9903   Low
cufflinks 27.7781 0.0 140.518 High  
cufflinks 27.1015 0.0 140.962 High  
cufflinks 26.1779 0.0 134.672 High  
cufflinks 0.407        
cufflinks 0.05     Low Low
cufflinks 0.251        
cufflinks 0.665       High
cufflinks 0.771       High
cufflinks 0.138        
cufflinks 0.318        
cufflinks 0.143        
cufflinks 0.332        
cufflinks 0.49       High
cufflinks 0.188        
cufflinks 0.099       Low
cufflinks 0.221        
cufflinks 0.322        
cufflinks 0.05     Low Low
cufflinks 0.216        
cufflinks 0.164        

0 Strain