Gene : Glyma.20G164100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10794:SF58 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Genomic Order:  1641
Name:  ? Glyma.20G164100 Secondary Identifier:  ? PAC:30521700
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G164100 0.5kb upstream 0.5kb upstream 6462 true Chr20: 40164070-40170531 Glycine max
Glyma.20G164100 0.5kb upstream 0.5kb upstream 500 false Chr20: 40170032-40170531 Glycine max
Glyma.20G164100 0.5kb downstream 0.5kb downstream 6462 true Chr20: 40163570-40170031 Glycine max
Glyma.20G164100 0.5kb downstream 0.5kb downstream 500 false Chr20: 40163570-40164069 Glycine max
Glyma.20G164100 1.0kb upstream 1.0kb upstream 6962 true Chr20: 40164070-40171031 Glycine max
Glyma.20G164100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 40170032-40171031 Glycine max
Glyma.20G164100 1.0kb downstream 1.0kb downstream 6962 true Chr20: 40163070-40170031 Glycine max
Glyma.20G164100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 40163070-40164069 Glycine max
Glyma.20G164100 2.0kb upstream 2.0kb upstream 7962 true Chr20: 40164070-40172031 Glycine max
Glyma.20G164100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 40170032-40172031 Glycine max
Glyma.20G164100 2.0kb downstream 2.0kb downstream 7962 true Chr20: 40162070-40170031 Glycine max
Glyma.20G164100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 40162070-40164069 Glycine max
Glyma.20G164100 5.0kb upstream 5.0kb upstream 10962 true Chr20: 40164070-40175031 Glycine max
Glyma.20G164100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 40170032-40175031 Glycine max
Glyma.20G164100 5.0kb downstream 5.0kb downstream 10962 true Chr20: 40159070-40170031 Glycine max
Glyma.20G164100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 40159070-40164069 Glycine max
Glyma.20G164100 10.0kb upstream 10.0kb upstream 15962 true Chr20: 40164070-40180031 Glycine max
Glyma.20G164100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 40170032-40180031 Glycine max
Glyma.20G164100 10.0kb downstream 10.0kb downstream 15962 true Chr20: 40154070-40170031 Glycine max
Glyma.20G164100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 40154070-40164069 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316138 5265 Fabidae View MSA
124068174 5270 Rosid View MSA
123739909 5271 Pentapetalae View MSA
122789492 5272 Eudicot View MSA
122042662 5273 Angiosperm View MSA
121345279 5274 Embryophyte View MSA
123428279 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.9592 0.0 119.686 High High
cufflinks 13.8548 0.0 59.1615    
cufflinks 13.876 0.0 58.8232    
cufflinks 17.3605 0.0 72.3742    
cufflinks 6.37772 0.0 29.6376    
cufflinks 6.30831 0.0 29.2193    
cufflinks 6.54259 0.0 30.1206    
cufflinks 11.9322 0.0 51.9663    
cufflinks 6.16349 0.0 25.5634    
cufflinks 0.74        
cufflinks 0.205       Low
cufflinks 1.476        
cufflinks 0.433        
cufflinks 0.482        
cufflinks 0.156       Low
cufflinks 1.042        
cufflinks 0.168       Low
cufflinks 1.82       High
cufflinks 0.82        
cufflinks 1.479        
cufflinks 0.168       Low
cufflinks 1.511        
cufflinks 1.984       High
cufflinks 0.253        
cufflinks 1.457        
cufflinks 0.177       Low

0 Strain