Gene : Glyma.20G166100 G. max Wm82.a2.v1
Defline:  (1 of 20) KOG4473 - Uncharacterized membrane protein Genomic Order:  1661
Name:  ? Glyma.20G166100 Secondary Identifier:  ? PAC:30523221
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G166100 0.5kb upstream 0.5kb upstream 1645 true Chr20: 40380272-40381916 Glycine max
Glyma.20G166100 0.5kb upstream 0.5kb upstream 500 false Chr20: 40380272-40380771 Glycine max
Glyma.20G166100 0.5kb downstream 0.5kb downstream 1645 true Chr20: 40380772-40382416 Glycine max
Glyma.20G166100 0.5kb downstream 0.5kb downstream 500 false Chr20: 40381917-40382416 Glycine max
Glyma.20G166100 1.0kb upstream 1.0kb upstream 2145 true Chr20: 40379772-40381916 Glycine max
Glyma.20G166100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 40379772-40380771 Glycine max
Glyma.20G166100 1.0kb downstream 1.0kb downstream 2145 true Chr20: 40380772-40382916 Glycine max
Glyma.20G166100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 40381917-40382916 Glycine max
Glyma.20G166100 2.0kb upstream 2.0kb upstream 3145 true Chr20: 40378772-40381916 Glycine max
Glyma.20G166100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 40378772-40380771 Glycine max
Glyma.20G166100 2.0kb downstream 2.0kb downstream 3145 true Chr20: 40380772-40383916 Glycine max
Glyma.20G166100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 40381917-40383916 Glycine max
Glyma.20G166100 5.0kb upstream 5.0kb upstream 6145 true Chr20: 40375772-40381916 Glycine max
Glyma.20G166100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 40375772-40380771 Glycine max
Glyma.20G166100 5.0kb downstream 5.0kb downstream 6145 true Chr20: 40380772-40386916 Glycine max
Glyma.20G166100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 40381917-40386916 Glycine max
Glyma.20G166100 10.0kb upstream 10.0kb upstream 11145 true Chr20: 40370772-40381916 Glycine max
Glyma.20G166100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 40370772-40380771 Glycine max
Glyma.20G166100 10.0kb downstream 10.0kb downstream 11145 true Chr20: 40380772-40391916 Glycine max
Glyma.20G166100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 40381917-40391916 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309326 5265 Fabidae View MSA
124067576 5270 Rosid View MSA
123753376 5271 Pentapetalae View MSA
122797490 5272 Eudicot View MSA
122043714 5273 Angiosperm View MSA
121351711 5274 Embryophyte View MSA
123428360 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.6396 0.0 19.9918    
cufflinks 0.800138 0.0 2.97172    
cufflinks 21.8951 0.0 58.7582 High High
cufflinks 5.43409 0.0 16.7832    
cufflinks 0.826843 0.0 3.06571    
cufflinks 0.121367 0.0 0.487223 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.35347 0.0 13.8719    
cufflinks 0.406395 0.0 1.55552    
cufflinks 0.616        
cufflinks 0.083        
cufflinks 8.588     High High
cufflinks 0.188        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.179        
cufflinks 0.361        
cufflinks 0.041     Low Low
cufflinks 5.038       High
cufflinks 0.317        
cufflinks 0.327        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.303        
cufflinks 0.806        
cufflinks 0.033     Low Low
cufflinks 0.642        
cufflinks 0.069        

0 Strain