Gene : Glyma.20G166200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23115:SF186 - EUKARYOTIC TRANSLATION INITIATION FACTOR 5B Genomic Order:  1662
Name:  ? Glyma.20G166200 Secondary Identifier:  ? PAC:30520296
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G166200 0.5kb upstream 0.5kb upstream 10558 true Chr20: 40387265-40397822 Glycine max
Glyma.20G166200 0.5kb upstream 0.5kb upstream 500 false Chr20: 40397323-40397822 Glycine max
Glyma.20G166200 0.5kb downstream 0.5kb downstream 10558 true Chr20: 40386765-40397322 Glycine max
Glyma.20G166200 0.5kb downstream 0.5kb downstream 500 false Chr20: 40386765-40387264 Glycine max
Glyma.20G166200 1.0kb upstream 1.0kb upstream 11058 true Chr20: 40387265-40398322 Glycine max
Glyma.20G166200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 40397323-40398322 Glycine max
Glyma.20G166200 1.0kb downstream 1.0kb downstream 11058 true Chr20: 40386265-40397322 Glycine max
Glyma.20G166200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 40386265-40387264 Glycine max
Glyma.20G166200 2.0kb upstream 2.0kb upstream 12058 true Chr20: 40387265-40399322 Glycine max
Glyma.20G166200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 40397323-40399322 Glycine max
Glyma.20G166200 2.0kb downstream 2.0kb downstream 12058 true Chr20: 40385265-40397322 Glycine max
Glyma.20G166200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 40385265-40387264 Glycine max
Glyma.20G166200 5.0kb upstream 5.0kb upstream 15058 true Chr20: 40387265-40402322 Glycine max
Glyma.20G166200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 40397323-40402322 Glycine max
Glyma.20G166200 5.0kb downstream 5.0kb downstream 15058 true Chr20: 40382265-40397322 Glycine max
Glyma.20G166200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 40382265-40387264 Glycine max
Glyma.20G166200 10.0kb upstream 10.0kb upstream 20058 true Chr20: 40387265-40407322 Glycine max
Glyma.20G166200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 40397323-40407322 Glycine max
Glyma.20G166200 10.0kb downstream 10.0kb downstream 20058 true Chr20: 40377265-40397322 Glycine max
Glyma.20G166200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 40377265-40387264 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303559 5265 Fabidae View MSA
124062120 5270 Rosid View MSA
123737205 5271 Pentapetalae View MSA
122786059 5272 Eudicot View MSA
122051139 5273 Angiosperm View MSA
121347361 5274 Embryophyte View MSA
123428388 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.6343 0.0 45.0145   High
cufflinks 9.10696 0.0 24.8088   Low
cufflinks 11.9668 0.0 33.4807    
cufflinks 11.2745 0.0 31.3306    
cufflinks 17.3109 0.0 50.4663   High
cufflinks 9.02612 0.0 24.5751   Low
cufflinks 13.0315 0.0 36.6532    
cufflinks 12.9019 0.0 36.3161    
cufflinks 11.0216 0.0 30.4846    
cufflinks 9.253     High  
cufflinks 7.367     High  
cufflinks 11.498     High  
cufflinks 16.736     High High
cufflinks 18.38     High High
cufflinks 6.501     High Low
cufflinks 7.764     High  
cufflinks 6.85     High  
cufflinks 9.988     High  
cufflinks 9.703     High  
cufflinks 6.816        
cufflinks 7.983     High  
cufflinks 7.876     High  
cufflinks 6.867        
cufflinks 8.334     High  
cufflinks 7.629     High  
cufflinks 9.514     High  

0 Strain