Gene : Glyma.20G167600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10871:SF6 - 40S RIBOSOMAL PROTEIN S18 Genomic Order:  1676
Name:  ? Glyma.20G167600 Secondary Identifier:  ? PAC:30523269
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G167600 0.5kb upstream 0.5kb upstream 2949 true Chr20: 40548173-40551121 Glycine max
Glyma.20G167600 0.5kb upstream 0.5kb upstream 500 false Chr20: 40548173-40548672 Glycine max
Glyma.20G167600 0.5kb downstream 0.5kb downstream 2949 true Chr20: 40548673-40551621 Glycine max
Glyma.20G167600 0.5kb downstream 0.5kb downstream 500 false Chr20: 40551122-40551621 Glycine max
Glyma.20G167600 1.0kb upstream 1.0kb upstream 3449 true Chr20: 40547673-40551121 Glycine max
Glyma.20G167600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 40547673-40548672 Glycine max
Glyma.20G167600 1.0kb downstream 1.0kb downstream 3449 true Chr20: 40548673-40552121 Glycine max
Glyma.20G167600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 40551122-40552121 Glycine max
Glyma.20G167600 2.0kb upstream 2.0kb upstream 4449 true Chr20: 40546673-40551121 Glycine max
Glyma.20G167600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 40546673-40548672 Glycine max
Glyma.20G167600 2.0kb downstream 2.0kb downstream 4449 true Chr20: 40548673-40553121 Glycine max
Glyma.20G167600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 40551122-40553121 Glycine max
Glyma.20G167600 5.0kb upstream 5.0kb upstream 7449 true Chr20: 40543673-40551121 Glycine max
Glyma.20G167600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 40543673-40548672 Glycine max
Glyma.20G167600 5.0kb downstream 5.0kb downstream 7449 true Chr20: 40548673-40556121 Glycine max
Glyma.20G167600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 40551122-40556121 Glycine max
Glyma.20G167600 10.0kb upstream 10.0kb upstream 12449 true Chr20: 40538673-40551121 Glycine max
Glyma.20G167600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 40538673-40548672 Glycine max
Glyma.20G167600 10.0kb downstream 10.0kb downstream 12449 true Chr20: 40548673-40561121 Glycine max
Glyma.20G167600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 40551122-40561121 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312708 5265 Fabidae View MSA
124071434 5270 Rosid View MSA
123753104 5271 Pentapetalae View MSA
122796798 5272 Eudicot View MSA
122048414 5273 Angiosperm View MSA
121348769 5274 Embryophyte View MSA
123423828 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.5991 0.0 66.1206 High  
cufflinks 36.6316 0.0 97.7284 High  
cufflinks 14.7034 0.0 40.8154   Low
cufflinks 22.2306 0.0 60.0046 High  
cufflinks 63.4331 0.0 172.01 High High
cufflinks 63.9027 0.0 173.451 High High
cufflinks 26.1797 0.0 70.2509 High  
cufflinks 35.0659 0.0 93.5555 High  
cufflinks 39.1267 0.0 104.418 High  
cufflinks 12.876     High  
cufflinks 2.038       Low
cufflinks 9.661     High  
cufflinks 43.76     High High
cufflinks 64.482     High High
cufflinks 1.008       Low
cufflinks 6.32        
cufflinks 9.393     High  
cufflinks 8.441     High  
cufflinks 15.479     High  
cufflinks 2.874        
cufflinks 3.924        
cufflinks 3.905        
cufflinks 7.704     High  
cufflinks 2.963        
cufflinks 5.503        
cufflinks 6.63     High  

0 Strain