Gene : Glyma.20G158500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Genomic Order:  1585
Name:  ? Glyma.20G158500 Secondary Identifier:  ? PAC:30520438
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G158500 0.5kb upstream 0.5kb upstream 3540 true Chr20: 39709490-39713029 Glycine max
Glyma.20G158500 0.5kb upstream 0.5kb upstream 500 false Chr20: 39709490-39709989 Glycine max
Glyma.20G158500 0.5kb downstream 0.5kb downstream 3540 true Chr20: 39709990-39713529 Glycine max
Glyma.20G158500 0.5kb downstream 0.5kb downstream 500 false Chr20: 39713030-39713529 Glycine max
Glyma.20G158500 1.0kb upstream 1.0kb upstream 4040 true Chr20: 39708990-39713029 Glycine max
Glyma.20G158500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 39708990-39709989 Glycine max
Glyma.20G158500 1.0kb downstream 1.0kb downstream 4040 true Chr20: 39709990-39714029 Glycine max
Glyma.20G158500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 39713030-39714029 Glycine max
Glyma.20G158500 2.0kb upstream 2.0kb upstream 5040 true Chr20: 39707990-39713029 Glycine max
Glyma.20G158500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 39707990-39709989 Glycine max
Glyma.20G158500 2.0kb downstream 2.0kb downstream 5040 true Chr20: 39709990-39715029 Glycine max
Glyma.20G158500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 39713030-39715029 Glycine max
Glyma.20G158500 5.0kb upstream 5.0kb upstream 8040 true Chr20: 39704990-39713029 Glycine max
Glyma.20G158500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 39704990-39709989 Glycine max
Glyma.20G158500 5.0kb downstream 5.0kb downstream 8040 true Chr20: 39709990-39718029 Glycine max
Glyma.20G158500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 39713030-39718029 Glycine max
Glyma.20G158500 10.0kb upstream 10.0kb upstream 13040 true Chr20: 39699990-39713029 Glycine max
Glyma.20G158500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 39699990-39709989 Glycine max
Glyma.20G158500 10.0kb downstream 10.0kb downstream 13040 true Chr20: 39709990-39723029 Glycine max
Glyma.20G158500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 39713030-39723029 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313287 5265 Fabidae View MSA
124069753 5270 Rosid View MSA
123745202 5271 Pentapetalae View MSA
122785813 5272 Eudicot View MSA
122050504 5273 Angiosperm View MSA
121311951 5274 Embryophyte View MSA
123349176 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.57463 0.0 7.83851    
cufflinks 1.04031 0.0 3.57191    
cufflinks 26.4554 0.0 72.5284 High High
cufflinks 2.37184 0.0 7.27948    
cufflinks 2.40622 0.0 7.40568    
cufflinks 4.07482 0.0 11.6859    
cufflinks 9.04325 0.0 24.3267    
cufflinks 0.739348 0.0 2.60969    
cufflinks 0.0548202 0.0 0.219472 Low Low
cufflinks 0.005     Low Low
cufflinks 2.152       High
cufflinks 23.003     High High
cufflinks 0.129        
cufflinks 0.29        
cufflinks 0.007     Low Low
cufflinks 0.216        
cufflinks 0.473        
cufflinks 3.169       High
cufflinks 0.171        
cufflinks 0.113        
cufflinks 1.482        
cufflinks 0.22        
cufflinks 0.084     Low  
cufflinks 0.04     Low  
cufflinks 0.261        
cufflinks 1.072        

0 Strain