Gene : Glyma.20G160500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10114 - 60S RIBOSOMAL PROTEIN L36 Genomic Order:  1605
Name:  ? Glyma.20G160500 Secondary Identifier:  ? PAC:30523066
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G160500 0.5kb upstream 0.5kb upstream 2314 true Chr20: 39878124-39880437 Glycine max
Glyma.20G160500 0.5kb upstream 0.5kb upstream 500 false Chr20: 39879938-39880437 Glycine max
Glyma.20G160500 0.5kb downstream 0.5kb downstream 2314 true Chr20: 39877624-39879937 Glycine max
Glyma.20G160500 0.5kb downstream 0.5kb downstream 500 false Chr20: 39877624-39878123 Glycine max
Glyma.20G160500 1.0kb upstream 1.0kb upstream 2814 true Chr20: 39878124-39880937 Glycine max
Glyma.20G160500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 39879938-39880937 Glycine max
Glyma.20G160500 1.0kb downstream 1.0kb downstream 2814 true Chr20: 39877124-39879937 Glycine max
Glyma.20G160500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 39877124-39878123 Glycine max
Glyma.20G160500 2.0kb upstream 2.0kb upstream 3814 true Chr20: 39878124-39881937 Glycine max
Glyma.20G160500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 39879938-39881937 Glycine max
Glyma.20G160500 2.0kb downstream 2.0kb downstream 3814 true Chr20: 39876124-39879937 Glycine max
Glyma.20G160500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 39876124-39878123 Glycine max
Glyma.20G160500 5.0kb upstream 5.0kb upstream 6814 true Chr20: 39878124-39884937 Glycine max
Glyma.20G160500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 39879938-39884937 Glycine max
Glyma.20G160500 5.0kb downstream 5.0kb downstream 6814 true Chr20: 39873124-39879937 Glycine max
Glyma.20G160500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 39873124-39878123 Glycine max
Glyma.20G160500 10.0kb upstream 10.0kb upstream 11814 true Chr20: 39878124-39889937 Glycine max
Glyma.20G160500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 39879938-39889937 Glycine max
Glyma.20G160500 10.0kb downstream 10.0kb downstream 11814 true Chr20: 39868124-39879937 Glycine max
Glyma.20G160500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 39868124-39878123 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122237903 5265 Fabidae Singleton cluster - no MSA
124066905 5270 Rosid View MSA
123747585 5271 Pentapetalae View MSA
122796759 5272 Eudicot View MSA
122049276 5273 Angiosperm View MSA
121349373 5274 Embryophyte View MSA
123424507 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 74.7094 0.0 304.317 High  
cufflinks 108.735 0.0 484.926 High  
cufflinks 31.8951 0.0 109.286 High Low
cufflinks 55.8546 0.0 228.527 High  
cufflinks 206.037 0.0 1018.82 High High
cufflinks 181.715 0.0 859.343 High High
cufflinks 109.778 0.0 429.095 High  
cufflinks 97.0972 0.0 418.992 High  
cufflinks 134.038 0.0 638.57 High  
cufflinks 12.66     High  
cufflinks 3.077       Low
cufflinks 7.964     High  
cufflinks 39.836     High High
cufflinks 55.422     High High
cufflinks 3.456       Low
cufflinks 12.018     High  
cufflinks 8.304     High  
cufflinks 9.469     High  
cufflinks 14.223     High  
cufflinks 7.96     High  
cufflinks 4.908        
cufflinks 8.692     High  
cufflinks 12.569     High  
cufflinks 4.198       Low
cufflinks 10.031     High  
cufflinks 7.619     High  

0 Strain