Gene : Glyma.20G162500 G. max Wm82.a2.v1
Genomic Order:  1625 Name:  ? Glyma.20G162500
Secondary Identifier:  ? PAC:30520897
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G162500 0.5kb upstream 0.5kb upstream 3331 true Chr20: 40019537-40022867 Glycine max
Glyma.20G162500 0.5kb upstream 0.5kb upstream 500 false Chr20: 40022368-40022867 Glycine max
Glyma.20G162500 0.5kb downstream 0.5kb downstream 3331 true Chr20: 40019037-40022367 Glycine max
Glyma.20G162500 0.5kb downstream 0.5kb downstream 500 false Chr20: 40019037-40019536 Glycine max
Glyma.20G162500 1.0kb upstream 1.0kb upstream 3831 true Chr20: 40019537-40023367 Glycine max
Glyma.20G162500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 40022368-40023367 Glycine max
Glyma.20G162500 1.0kb downstream 1.0kb downstream 3831 true Chr20: 40018537-40022367 Glycine max
Glyma.20G162500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 40018537-40019536 Glycine max
Glyma.20G162500 2.0kb upstream 2.0kb upstream 4831 true Chr20: 40019537-40024367 Glycine max
Glyma.20G162500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 40022368-40024367 Glycine max
Glyma.20G162500 2.0kb downstream 2.0kb downstream 4831 true Chr20: 40017537-40022367 Glycine max
Glyma.20G162500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 40017537-40019536 Glycine max
Glyma.20G162500 5.0kb upstream 5.0kb upstream 7831 true Chr20: 40019537-40027367 Glycine max
Glyma.20G162500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 40022368-40027367 Glycine max
Glyma.20G162500 5.0kb downstream 5.0kb downstream 7831 true Chr20: 40014537-40022367 Glycine max
Glyma.20G162500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 40014537-40019536 Glycine max
Glyma.20G162500 10.0kb upstream 10.0kb upstream 12831 true Chr20: 40019537-40032367 Glycine max
Glyma.20G162500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 40022368-40032367 Glycine max
Glyma.20G162500 10.0kb downstream 10.0kb downstream 12831 true Chr20: 40009537-40022367 Glycine max
Glyma.20G162500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 40009537-40019536 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250689 5265 Fabidae View MSA
124064876 5270 Rosid View MSA
123742190 5271 Pentapetalae View MSA
122791015 5272 Eudicot View MSA
122047689 5273 Angiosperm View MSA
121310779 5274 Embryophyte View MSA
123348183 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.1586 0.0 40.3989    
cufflinks 10.2982 0.0 32.773    
cufflinks 11.7072 0.0 36.2904    
cufflinks 16.8552 0.0 50.5206    
cufflinks 13.3122 0.0 40.9184    
cufflinks 25.9826 0.0 77.6778 High High
cufflinks 8.90966 0.0 29.2318   Low
cufflinks 17.2164 0.0 51.6049    
cufflinks 11.574 0.0 36.0993    
cufflinks 6.76        
cufflinks 5.928     High  
cufflinks 7.589     High  
cufflinks 6.633        
cufflinks 6.613        
cufflinks 3.787       Low
cufflinks 6.465        
cufflinks 4.091       Low
cufflinks 11.118     High High
cufflinks 4.478       Low
cufflinks 5.96        
cufflinks 6.844     High  
cufflinks 6.779        
cufflinks 6.353        
cufflinks 7.462     High  
cufflinks 5.644        
cufflinks 6.987     High  

0 Strain