Gene : Glyma.20G162900 G. max Wm82.a2.v1
Defline:  (1 of 17) PTHR22814:SF129 - COPPER TRANSPORT FAMILY PROTEIN-RELATED Genomic Order:  1629
Name:  ? Glyma.20G162900 Secondary Identifier:  ? PAC:30522466
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G162900 0.5kb upstream 0.5kb upstream 1422 true Chr20: 40052935-40054356 Glycine max
Glyma.20G162900 0.5kb upstream 0.5kb upstream 500 false Chr20: 40052935-40053434 Glycine max
Glyma.20G162900 0.5kb downstream 0.5kb downstream 1422 true Chr20: 40053435-40054856 Glycine max
Glyma.20G162900 0.5kb downstream 0.5kb downstream 500 false Chr20: 40054357-40054856 Glycine max
Glyma.20G162900 1.0kb upstream 1.0kb upstream 1922 true Chr20: 40052435-40054356 Glycine max
Glyma.20G162900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 40052435-40053434 Glycine max
Glyma.20G162900 1.0kb downstream 1.0kb downstream 1922 true Chr20: 40053435-40055356 Glycine max
Glyma.20G162900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 40054357-40055356 Glycine max
Glyma.20G162900 2.0kb upstream 2.0kb upstream 2922 true Chr20: 40051435-40054356 Glycine max
Glyma.20G162900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 40051435-40053434 Glycine max
Glyma.20G162900 2.0kb downstream 2.0kb downstream 2922 true Chr20: 40053435-40056356 Glycine max
Glyma.20G162900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 40054357-40056356 Glycine max
Glyma.20G162900 5.0kb upstream 5.0kb upstream 5922 true Chr20: 40048435-40054356 Glycine max
Glyma.20G162900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 40048435-40053434 Glycine max
Glyma.20G162900 5.0kb downstream 5.0kb downstream 5922 true Chr20: 40053435-40059356 Glycine max
Glyma.20G162900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 40054357-40059356 Glycine max
Glyma.20G162900 10.0kb upstream 10.0kb upstream 10922 true Chr20: 40043435-40054356 Glycine max
Glyma.20G162900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 40043435-40053434 Glycine max
Glyma.20G162900 10.0kb downstream 10.0kb downstream 10922 true Chr20: 40053435-40064356 Glycine max
Glyma.20G162900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 40054357-40064356 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298097 5265 Fabidae View MSA
124072200 5270 Rosid View MSA
123751300 5271 Pentapetalae View MSA
122793053 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.138583 0.0 0.565386 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.7756 0.0 21.8125    
cufflinks 31.4712 0.0 85.0678 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.77849 0.0 18.9536    
cufflinks 0.017     Low Low
cufflinks 1.955        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 32.205     High High
cufflinks 26.509     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.063     Low  
cufflinks 2.26        
cufflinks 0.032     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low Low
cufflinks 1.777        
cufflinks 0.06     Low  
cufflinks 0.192        
cufflinks 1.521        
cufflinks 0.136        
cufflinks 2.915        

0 Strain