Gene : Glyma.20G153900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10584//PTHR10584:SF200 - SUGAR KINASE Genomic Order:  1539
Name:  ? Glyma.20G153900 Secondary Identifier:  ? PAC:30522047
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3801 Glycine max pathologic  
Gmax PWY-4101 Glycine max pathologic  
Gmax PWY-621 Glycine max pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G153900 0.5kb upstream 0.5kb upstream 4157 true Chr20: 39280684-39284840 Glycine max
Glyma.20G153900 0.5kb upstream 0.5kb upstream 500 false Chr20: 39280684-39281183 Glycine max
Glyma.20G153900 0.5kb downstream 0.5kb downstream 4157 true Chr20: 39281184-39285340 Glycine max
Glyma.20G153900 0.5kb downstream 0.5kb downstream 500 false Chr20: 39284841-39285340 Glycine max
Glyma.20G153900 1.0kb upstream 1.0kb upstream 4657 true Chr20: 39280184-39284840 Glycine max
Glyma.20G153900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 39280184-39281183 Glycine max
Glyma.20G153900 1.0kb downstream 1.0kb downstream 4657 true Chr20: 39281184-39285840 Glycine max
Glyma.20G153900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 39284841-39285840 Glycine max
Glyma.20G153900 2.0kb upstream 2.0kb upstream 5657 true Chr20: 39279184-39284840 Glycine max
Glyma.20G153900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 39279184-39281183 Glycine max
Glyma.20G153900 2.0kb downstream 2.0kb downstream 5657 true Chr20: 39281184-39286840 Glycine max
Glyma.20G153900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 39284841-39286840 Glycine max
Glyma.20G153900 5.0kb upstream 5.0kb upstream 8657 true Chr20: 39276184-39284840 Glycine max
Glyma.20G153900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 39276184-39281183 Glycine max
Glyma.20G153900 5.0kb downstream 5.0kb downstream 8657 true Chr20: 39281184-39289840 Glycine max
Glyma.20G153900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 39284841-39289840 Glycine max
Glyma.20G153900 10.0kb upstream 10.0kb upstream 13657 true Chr20: 39271184-39284840 Glycine max
Glyma.20G153900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 39271184-39281183 Glycine max
Glyma.20G153900 10.0kb downstream 10.0kb downstream 13657 true Chr20: 39281184-39294840 Glycine max
Glyma.20G153900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 39284841-39294840 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310303 5265 Fabidae View MSA
124069533 5270 Rosid View MSA
123742774 5271 Pentapetalae View MSA
122790590 5272 Eudicot View MSA
122045850 5273 Angiosperm View MSA
121350713 5274 Embryophyte View MSA
123424695 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.65531 0.0 16.7417    
cufflinks 5.7773 0.0 17.0069    
cufflinks 2.05677 0.0 6.95019   Low
cufflinks 5.64712 0.0 16.676    
cufflinks 5.56012 0.0 16.5115    
cufflinks 5.69383 0.0 16.8101    
cufflinks 4.90382 0.0 14.823    
cufflinks 5.12578 0.0 15.3244    
cufflinks 2.83188 0.0 9.20804   Low
cufflinks 1.341        
cufflinks 0.896        
cufflinks 1.302        
cufflinks 3.639       High
cufflinks 4.633       High
cufflinks 0.359       Low
cufflinks 1.64        
cufflinks 0.754       Low
cufflinks 1.947        
cufflinks 2.761       High
cufflinks 1.146        
cufflinks 0.837        
cufflinks 1.391        
cufflinks 1.768        
cufflinks 1.29        
cufflinks 1.607        
cufflinks 1.238        

0 Strain