Gene : Glyma.20G154000 G. max Wm82.a2.v1
Genomic Order:  1540 Name:  ? Glyma.20G154000
Secondary Identifier:  ? PAC:30520770
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G154000 0.5kb upstream 0.5kb upstream 4866 true Chr20: 39284960-39289825 Glycine max
Glyma.20G154000 0.5kb upstream 0.5kb upstream 500 false Chr20: 39284960-39285459 Glycine max
Glyma.20G154000 0.5kb downstream 0.5kb downstream 4866 true Chr20: 39285460-39290325 Glycine max
Glyma.20G154000 0.5kb downstream 0.5kb downstream 500 false Chr20: 39289826-39290325 Glycine max
Glyma.20G154000 1.0kb upstream 1.0kb upstream 5366 true Chr20: 39284460-39289825 Glycine max
Glyma.20G154000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 39284460-39285459 Glycine max
Glyma.20G154000 1.0kb downstream 1.0kb downstream 5366 true Chr20: 39285460-39290825 Glycine max
Glyma.20G154000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 39289826-39290825 Glycine max
Glyma.20G154000 2.0kb upstream 2.0kb upstream 6366 true Chr20: 39283460-39289825 Glycine max
Glyma.20G154000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 39283460-39285459 Glycine max
Glyma.20G154000 2.0kb downstream 2.0kb downstream 6366 true Chr20: 39285460-39291825 Glycine max
Glyma.20G154000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 39289826-39291825 Glycine max
Glyma.20G154000 5.0kb upstream 5.0kb upstream 9366 true Chr20: 39280460-39289825 Glycine max
Glyma.20G154000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 39280460-39285459 Glycine max
Glyma.20G154000 5.0kb downstream 5.0kb downstream 9366 true Chr20: 39285460-39294825 Glycine max
Glyma.20G154000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 39289826-39294825 Glycine max
Glyma.20G154000 10.0kb upstream 10.0kb upstream 14366 true Chr20: 39275460-39289825 Glycine max
Glyma.20G154000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 39275460-39285459 Glycine max
Glyma.20G154000 10.0kb downstream 10.0kb downstream 14366 true Chr20: 39285460-39299825 Glycine max
Glyma.20G154000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 39289826-39299825 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304358 5265 Fabidae View MSA
124069081 5270 Rosid View MSA
123736919 5271 Pentapetalae View MSA
122788621 5272 Eudicot View MSA
122047565 5273 Angiosperm View MSA
121345240 5274 Embryophyte View MSA
123426204 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.98736 0.0 13.1249    
cufflinks 5.30086 0.0 19.5296    
cufflinks 1.27511 0.0 7.05982   Low
cufflinks 5.77325 0.0 20.84    
cufflinks 6.52583 0.0 22.3892    
cufflinks 17.2307 0.0 52.9902   High
cufflinks 4.82134 0.0 18.2209    
cufflinks 7.48922 0.0 24.9906    
cufflinks 5.38632 0.0 19.6888    
cufflinks 1.393        
cufflinks 2.554       High
cufflinks 0.505       Low
cufflinks 1.325        
cufflinks 1.294        
cufflinks 0.681       Low
cufflinks 1.944        
cufflinks 0.863        
cufflinks 0.963        
cufflinks 0.894        
cufflinks 1.706        
cufflinks 1.527        
cufflinks 1.615        
cufflinks 1.193        
cufflinks 2.165       High
cufflinks 1.754        
cufflinks 1.387        

0 Strain