Gene : Glyma.20G154700 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR14237:SF28 - CATALYTIC/ PYRIDOXAL PHOSPHATE BINDING PROTEIN Genomic Order:  1547
Name:  ? Glyma.20G154700 Secondary Identifier:  ? PAC:30522624
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5963 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G154700 0.5kb upstream 0.5kb upstream 3129 true Chr20: 39352536-39355664 Glycine max
Glyma.20G154700 0.5kb upstream 0.5kb upstream 500 false Chr20: 39355165-39355664 Glycine max
Glyma.20G154700 0.5kb downstream 0.5kb downstream 3129 true Chr20: 39352036-39355164 Glycine max
Glyma.20G154700 0.5kb downstream 0.5kb downstream 500 false Chr20: 39352036-39352535 Glycine max
Glyma.20G154700 1.0kb upstream 1.0kb upstream 3629 true Chr20: 39352536-39356164 Glycine max
Glyma.20G154700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 39355165-39356164 Glycine max
Glyma.20G154700 1.0kb downstream 1.0kb downstream 3629 true Chr20: 39351536-39355164 Glycine max
Glyma.20G154700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 39351536-39352535 Glycine max
Glyma.20G154700 2.0kb upstream 2.0kb upstream 4629 true Chr20: 39352536-39357164 Glycine max
Glyma.20G154700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 39355165-39357164 Glycine max
Glyma.20G154700 2.0kb downstream 2.0kb downstream 4629 true Chr20: 39350536-39355164 Glycine max
Glyma.20G154700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 39350536-39352535 Glycine max
Glyma.20G154700 5.0kb upstream 5.0kb upstream 7629 true Chr20: 39352536-39360164 Glycine max
Glyma.20G154700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 39355165-39360164 Glycine max
Glyma.20G154700 5.0kb downstream 5.0kb downstream 7629 true Chr20: 39347536-39355164 Glycine max
Glyma.20G154700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 39347536-39352535 Glycine max
Glyma.20G154700 10.0kb upstream 10.0kb upstream 12629 true Chr20: 39352536-39365164 Glycine max
Glyma.20G154700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 39355165-39365164 Glycine max
Glyma.20G154700 10.0kb downstream 10.0kb downstream 12629 true Chr20: 39342536-39355164 Glycine max
Glyma.20G154700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 39342536-39352535 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314685 5265 Fabidae View MSA
124069827 5270 Rosid View MSA
123745676 5271 Pentapetalae View MSA
122790060 5272 Eudicot View MSA
122044983 5273 Angiosperm View MSA
121350233 5274 Embryophyte View MSA
123381636 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.48029 0.0 25.3874   High
cufflinks 1.33039 0.0 4.39083   Low
cufflinks 10.5313 0.0 28.1162   High
cufflinks 1.98794 0.0 6.18842    
cufflinks 1.7774 0.0 5.65328    
cufflinks 10.8834 0.0 29.0637   High
cufflinks 3.20539 0.0 9.37979    
cufflinks 7.31512 0.0 19.7533    
cufflinks 1.59557 0.0 5.13734    
cufflinks 4.513        
cufflinks 1.794        
cufflinks 8.822     High High
cufflinks 3.186        
cufflinks 0.424       Low
cufflinks 0.03     Low Low
cufflinks 1.512        
cufflinks 13.449     High High
cufflinks 1.342        
cufflinks 2.085        
cufflinks 1.059        
cufflinks 1.97        
cufflinks 1.442        
cufflinks 2.898        
cufflinks 2.729        
cufflinks 0.841        
cufflinks 3.82        

0 Strain