Gene : Glyma.20G155200 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  1552
Name:  ? Glyma.20G155200 Secondary Identifier:  ? PAC:30522828
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G155200 0.5kb upstream 0.5kb upstream 2112 true Chr20: 39404260-39406371 Glycine max
Glyma.20G155200 0.5kb upstream 0.5kb upstream 500 false Chr20: 39405872-39406371 Glycine max
Glyma.20G155200 0.5kb downstream 0.5kb downstream 2112 true Chr20: 39403760-39405871 Glycine max
Glyma.20G155200 0.5kb downstream 0.5kb downstream 500 false Chr20: 39403760-39404259 Glycine max
Glyma.20G155200 1.0kb upstream 1.0kb upstream 2612 true Chr20: 39404260-39406871 Glycine max
Glyma.20G155200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 39405872-39406871 Glycine max
Glyma.20G155200 1.0kb downstream 1.0kb downstream 2612 true Chr20: 39403260-39405871 Glycine max
Glyma.20G155200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 39403260-39404259 Glycine max
Glyma.20G155200 2.0kb upstream 2.0kb upstream 3612 true Chr20: 39404260-39407871 Glycine max
Glyma.20G155200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 39405872-39407871 Glycine max
Glyma.20G155200 2.0kb downstream 2.0kb downstream 3612 true Chr20: 39402260-39405871 Glycine max
Glyma.20G155200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 39402260-39404259 Glycine max
Glyma.20G155200 5.0kb upstream 5.0kb upstream 6612 true Chr20: 39404260-39410871 Glycine max
Glyma.20G155200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 39405872-39410871 Glycine max
Glyma.20G155200 5.0kb downstream 5.0kb downstream 6612 true Chr20: 39399260-39405871 Glycine max
Glyma.20G155200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 39399260-39404259 Glycine max
Glyma.20G155200 10.0kb upstream 10.0kb upstream 11612 true Chr20: 39404260-39415871 Glycine max
Glyma.20G155200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 39405872-39415871 Glycine max
Glyma.20G155200 10.0kb downstream 10.0kb downstream 11612 true Chr20: 39394260-39405871 Glycine max
Glyma.20G155200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 39394260-39404259 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303157 5265 Fabidae View MSA
124070637 5270 Rosid View MSA
123747343 5271 Pentapetalae View MSA
122787056 5272 Eudicot View MSA
122049572 5273 Angiosperm View MSA
121351578 5274 Embryophyte View MSA
123382234 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.53524 0.0 1.99031    
cufflinks 2.83085 0.0 9.13074    
cufflinks 0.525686 0.0 1.95965    
cufflinks 0.207792 0.0 0.807033    
cufflinks 0.57112 0.0 2.1152    
cufflinks 0.816537 0.0 2.96394    
cufflinks 0.0129745 0.0 0.059426 Low Low
cufflinks 6.88201 0.0 19.6887   High
cufflinks 0.828836 0.0 3.00836    
cufflinks 27.814     High  
cufflinks 48.415     High  
cufflinks 1.735        
cufflinks 1.038        
cufflinks 0.026     Low Low
cufflinks 5.733     High  
cufflinks 11.585     High  
cufflinks 331.273     High High
cufflinks 0.976        
cufflinks 1.279        
cufflinks 5.799        
cufflinks 86.201     High High
cufflinks 7.217     High  
cufflinks 2.501        
cufflinks 43.091     High  
cufflinks 7.061     High  
cufflinks 68.902     High High

0 Strain