Gene : Glyma.20G155600 G. max Wm82.a2.v1
Defline:  (1 of 5) 1.17.1.8 - 4-hydroxy-tetrahydrodipicolinate reductase / Dihydrodipicolinate reductase Genomic Order:  1556
Name:  ? Glyma.20G155600 Secondary Identifier:  ? PAC:30521289
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5097 Glycine max pathologic  
Gmax PWY-724 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G155600 0.5kb upstream 0.5kb upstream 4812 true Chr20: 39449199-39454010 Glycine max
Glyma.20G155600 0.5kb upstream 0.5kb upstream 500 false Chr20: 39449199-39449698 Glycine max
Glyma.20G155600 0.5kb downstream 0.5kb downstream 4812 true Chr20: 39449699-39454510 Glycine max
Glyma.20G155600 0.5kb downstream 0.5kb downstream 500 false Chr20: 39454011-39454510 Glycine max
Glyma.20G155600 1.0kb upstream 1.0kb upstream 5312 true Chr20: 39448699-39454010 Glycine max
Glyma.20G155600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 39448699-39449698 Glycine max
Glyma.20G155600 1.0kb downstream 1.0kb downstream 5312 true Chr20: 39449699-39455010 Glycine max
Glyma.20G155600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 39454011-39455010 Glycine max
Glyma.20G155600 2.0kb upstream 2.0kb upstream 6312 true Chr20: 39447699-39454010 Glycine max
Glyma.20G155600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 39447699-39449698 Glycine max
Glyma.20G155600 2.0kb downstream 2.0kb downstream 6312 true Chr20: 39449699-39456010 Glycine max
Glyma.20G155600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 39454011-39456010 Glycine max
Glyma.20G155600 5.0kb upstream 5.0kb upstream 9312 true Chr20: 39444699-39454010 Glycine max
Glyma.20G155600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 39444699-39449698 Glycine max
Glyma.20G155600 5.0kb downstream 5.0kb downstream 9312 true Chr20: 39449699-39459010 Glycine max
Glyma.20G155600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 39454011-39459010 Glycine max
Glyma.20G155600 10.0kb upstream 10.0kb upstream 14312 true Chr20: 39439699-39454010 Glycine max
Glyma.20G155600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 39439699-39449698 Glycine max
Glyma.20G155600 10.0kb downstream 10.0kb downstream 14312 true Chr20: 39449699-39464010 Glycine max
Glyma.20G155600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 39454011-39464010 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302709 5265 Fabidae View MSA
124065069 5270 Rosid View MSA
123739710 5271 Pentapetalae View MSA
122786759 5272 Eudicot View MSA
122042958 5273 Angiosperm View MSA
121344567 5274 Embryophyte View MSA
123380066 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.50998 0.0 18.8094   High
cufflinks 4.26811 0.0 21.5172   High
cufflinks 0.326969 0.0 1.60583    
cufflinks 0.635522 0.0 5.20825    
cufflinks 0.452288 0.0 3.17107    
cufflinks 0.287153 0.0 1.40817 Low  
cufflinks 0.121225 0.0 0.482849 Low Low
cufflinks 1.39805 0.0 9.60493    
cufflinks 0.0860365 0.0 0.348536 Low Low
cufflinks 0.207        
cufflinks 0.009     Low  
cufflinks 0.05     Low  
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 1.937        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low  
cufflinks 0.413        
cufflinks 3.039       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.385       High
cufflinks 1.627        
cufflinks 0.003     Low Low
cufflinks 2.687       High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain