Gene : Glyma.20G157900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10641:SF563 - MYB TRANSCRIPTION FACTOR-RELATED Genomic Order:  1579
Name:  ? Glyma.20G157900 Secondary Identifier:  ? PAC:30519807
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G157900 0.5kb upstream 0.5kb upstream 4721 true Chr20: 39666284-39671004 Glycine max
Glyma.20G157900 0.5kb upstream 0.5kb upstream 500 false Chr20: 39666284-39666783 Glycine max
Glyma.20G157900 0.5kb downstream 0.5kb downstream 4721 true Chr20: 39666784-39671504 Glycine max
Glyma.20G157900 0.5kb downstream 0.5kb downstream 500 false Chr20: 39671005-39671504 Glycine max
Glyma.20G157900 1.0kb upstream 1.0kb upstream 5221 true Chr20: 39665784-39671004 Glycine max
Glyma.20G157900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 39665784-39666783 Glycine max
Glyma.20G157900 1.0kb downstream 1.0kb downstream 5221 true Chr20: 39666784-39672004 Glycine max
Glyma.20G157900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 39671005-39672004 Glycine max
Glyma.20G157900 2.0kb upstream 2.0kb upstream 6221 true Chr20: 39664784-39671004 Glycine max
Glyma.20G157900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 39664784-39666783 Glycine max
Glyma.20G157900 2.0kb downstream 2.0kb downstream 6221 true Chr20: 39666784-39673004 Glycine max
Glyma.20G157900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 39671005-39673004 Glycine max
Glyma.20G157900 5.0kb upstream 5.0kb upstream 9221 true Chr20: 39661784-39671004 Glycine max
Glyma.20G157900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 39661784-39666783 Glycine max
Glyma.20G157900 5.0kb downstream 5.0kb downstream 9221 true Chr20: 39666784-39676004 Glycine max
Glyma.20G157900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 39671005-39676004 Glycine max
Glyma.20G157900 10.0kb upstream 10.0kb upstream 14221 true Chr20: 39656784-39671004 Glycine max
Glyma.20G157900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 39656784-39666783 Glycine max
Glyma.20G157900 10.0kb downstream 10.0kb downstream 14221 true Chr20: 39666784-39681004 Glycine max
Glyma.20G157900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 39671005-39681004 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309143 5265 Fabidae View MSA
124067313 5270 Rosid View MSA
123750706 5271 Pentapetalae View MSA
122786386 5272 Eudicot View MSA
122049039 5273 Angiosperm View MSA
121311219 5274 Embryophyte View MSA
123348543 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0525902 0.0 0.22025 Low Low
cufflinks 1.37313 0.0 10.0794    
cufflinks 0.609686 0.0 5.24924    
cufflinks 0.322839 0.0 1.2397    
cufflinks 1.35425 0.0 8.2185    
cufflinks 62.5463 0.0 262.096 High High
cufflinks 0.0236959 0.0 0.123177 Low Low
cufflinks 0.321934 0.0 2.3247    
cufflinks 6.76613 0.0 30.5364    
cufflinks 0.087     Low  
cufflinks 0.162        
cufflinks 0.145        
cufflinks 2.078       High
cufflinks 0.212        
cufflinks 0.051     Low  
cufflinks 0.002     Low Low
cufflinks 0.587        
cufflinks 0.101     Low  
cufflinks 0.872       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.25        
cufflinks 0.001     Low Low
cufflinks 0.02     Low  
cufflinks 0.206        
cufflinks 0.015     Low  
cufflinks 0.382        

0 Strain