Gene : Glyma.20G150300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10015:SF139 - HEAT STRESS TRANSCRIPTION FACTOR A-6A-RELATED Genomic Order:  1503
Name:  ? Glyma.20G150300 Secondary Identifier:  ? PAC:30520690
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G150300 0.5kb upstream 0.5kb upstream 3056 true Chr20: 38921566-38924621 Glycine max
Glyma.20G150300 0.5kb upstream 0.5kb upstream 500 false Chr20: 38921566-38922065 Glycine max
Glyma.20G150300 0.5kb downstream 0.5kb downstream 3056 true Chr20: 38922066-38925121 Glycine max
Glyma.20G150300 0.5kb downstream 0.5kb downstream 500 false Chr20: 38924622-38925121 Glycine max
Glyma.20G150300 1.0kb upstream 1.0kb upstream 3556 true Chr20: 38921066-38924621 Glycine max
Glyma.20G150300 1.0kb upstream 1.0kb upstream 1000 false Chr20: 38921066-38922065 Glycine max
Glyma.20G150300 1.0kb downstream 1.0kb downstream 3556 true Chr20: 38922066-38925621 Glycine max
Glyma.20G150300 1.0kb downstream 1.0kb downstream 1000 false Chr20: 38924622-38925621 Glycine max
Glyma.20G150300 2.0kb upstream 2.0kb upstream 4556 true Chr20: 38920066-38924621 Glycine max
Glyma.20G150300 2.0kb upstream 2.0kb upstream 2000 false Chr20: 38920066-38922065 Glycine max
Glyma.20G150300 2.0kb downstream 2.0kb downstream 4556 true Chr20: 38922066-38926621 Glycine max
Glyma.20G150300 2.0kb downstream 2.0kb downstream 2000 false Chr20: 38924622-38926621 Glycine max
Glyma.20G150300 5.0kb upstream 5.0kb upstream 7556 true Chr20: 38917066-38924621 Glycine max
Glyma.20G150300 5.0kb upstream 5.0kb upstream 5000 false Chr20: 38917066-38922065 Glycine max
Glyma.20G150300 5.0kb downstream 5.0kb downstream 7556 true Chr20: 38922066-38929621 Glycine max
Glyma.20G150300 5.0kb downstream 5.0kb downstream 5000 false Chr20: 38924622-38929621 Glycine max
Glyma.20G150300 10.0kb upstream 10.0kb upstream 12556 true Chr20: 38912066-38924621 Glycine max
Glyma.20G150300 10.0kb upstream 10.0kb upstream 10000 false Chr20: 38912066-38922065 Glycine max
Glyma.20G150300 10.0kb downstream 10.0kb downstream 12556 true Chr20: 38922066-38934621 Glycine max
Glyma.20G150300 10.0kb downstream 10.0kb downstream 10000 false Chr20: 38924622-38934621 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313296 5265 Fabidae View MSA
124062717 5270 Rosid View MSA
123744763 5271 Pentapetalae View MSA
122793858 5272 Eudicot View MSA
122049112 5273 Angiosperm View MSA
121311252 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.637294 0.0 2.3054    
cufflinks 0.0817754 0.0 0.324287 Low  
cufflinks 0.0451443 0.0 0.183013 Low Low
cufflinks 0.0285276 0.0 0.11883 Low Low
cufflinks 0.472292 0.0 1.73977    
cufflinks 0.721595 0.0 2.5883    
cufflinks 0.104652 0.0 0.411845 Low  
cufflinks 0.681763 0.0 2.44942    
cufflinks 0.868278 0.0 3.0689   High
cufflinks 0.127        
cufflinks 0.06        
cufflinks 0.097     Low  
cufflinks 0.828       High
cufflinks 0.045     Low Low
cufflinks 0.355        
cufflinks 0.379        
cufflinks 0.039     Low Low
cufflinks 0.633       High
cufflinks 0.037     Low Low
cufflinks 0.355        
cufflinks 0.049     Low Low
cufflinks 0.517       High
cufflinks 0.445        
cufflinks 0.082        
cufflinks 0.341        
cufflinks 0.098        

0 Strain