Gene : Glyma.20G151900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12621 - CYSTEINE AND HISTIDINE-RICH DOMAIN CHORD -CONTAINING PROTEIN Genomic Order:  1519
Name:  ? Glyma.20G151900 Secondary Identifier:  ? PAC:30520950
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G151900 0.5kb upstream 0.5kb upstream 5645 true Chr20: 39077995-39083639 Glycine max
Glyma.20G151900 0.5kb upstream 0.5kb upstream 500 false Chr20: 39083140-39083639 Glycine max
Glyma.20G151900 0.5kb downstream 0.5kb downstream 5645 true Chr20: 39077495-39083139 Glycine max
Glyma.20G151900 0.5kb downstream 0.5kb downstream 500 false Chr20: 39077495-39077994 Glycine max
Glyma.20G151900 1.0kb upstream 1.0kb upstream 6145 true Chr20: 39077995-39084139 Glycine max
Glyma.20G151900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 39083140-39084139 Glycine max
Glyma.20G151900 1.0kb downstream 1.0kb downstream 6145 true Chr20: 39076995-39083139 Glycine max
Glyma.20G151900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 39076995-39077994 Glycine max
Glyma.20G151900 2.0kb upstream 2.0kb upstream 7145 true Chr20: 39077995-39085139 Glycine max
Glyma.20G151900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 39083140-39085139 Glycine max
Glyma.20G151900 2.0kb downstream 2.0kb downstream 7145 true Chr20: 39075995-39083139 Glycine max
Glyma.20G151900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 39075995-39077994 Glycine max
Glyma.20G151900 5.0kb upstream 5.0kb upstream 10145 true Chr20: 39077995-39088139 Glycine max
Glyma.20G151900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 39083140-39088139 Glycine max
Glyma.20G151900 5.0kb downstream 5.0kb downstream 10145 true Chr20: 39072995-39083139 Glycine max
Glyma.20G151900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 39072995-39077994 Glycine max
Glyma.20G151900 10.0kb upstream 10.0kb upstream 15145 true Chr20: 39077995-39093139 Glycine max
Glyma.20G151900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 39083140-39093139 Glycine max
Glyma.20G151900 10.0kb downstream 10.0kb downstream 15145 true Chr20: 39067995-39083139 Glycine max
Glyma.20G151900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 39067995-39077994 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309315 5265 Fabidae View MSA
124062885 5270 Rosid View MSA
123738492 5271 Pentapetalae View MSA
122790880 5272 Eudicot View MSA
122044060 5273 Angiosperm View MSA
121346459 5274 Embryophyte View MSA
123425160 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.7406 0.0 64.6244    
cufflinks 15.9582 0.0 63.0558    
cufflinks 13.6315 0.0 53.6501   Low
cufflinks 13.3523 0.0 53.9294   Low
cufflinks 17.0012 0.0 67.2064    
cufflinks 17.7892 0.0 68.8744   High
cufflinks 14.7788 0.0 52.148    
cufflinks 16.5487 0.0 64.5685    
cufflinks 17.1406 0.0 67.3597    
cufflinks 1.466        
cufflinks 1.12       Low
cufflinks 1.345        
cufflinks 1.602       High
cufflinks 1.936       High
cufflinks 1.568        
cufflinks 1.222        
cufflinks 1.362        
cufflinks 1.544        
cufflinks 1.534        
cufflinks 1.37        
cufflinks 1.139       Low
cufflinks 1.353        
cufflinks 1.327        
cufflinks 1.138       Low
cufflinks 1.358        
cufflinks 1.244        

0 Strain