Gene : Glyma.20G152400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10030:SF25 - ALPHA-L-FUCOSIDASE-RELATED Genomic Order:  1524
Name:  ? Glyma.20G152400 Secondary Identifier:  ? PAC:30523346
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G152400 0.5kb upstream 0.5kb upstream 3008 true Chr20: 39120600-39123607 Glycine max
Glyma.20G152400 0.5kb upstream 0.5kb upstream 500 false Chr20: 39123108-39123607 Glycine max
Glyma.20G152400 0.5kb downstream 0.5kb downstream 3008 true Chr20: 39120100-39123107 Glycine max
Glyma.20G152400 0.5kb downstream 0.5kb downstream 500 false Chr20: 39120100-39120599 Glycine max
Glyma.20G152400 1.0kb upstream 1.0kb upstream 3508 true Chr20: 39120600-39124107 Glycine max
Glyma.20G152400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 39123108-39124107 Glycine max
Glyma.20G152400 1.0kb downstream 1.0kb downstream 3508 true Chr20: 39119600-39123107 Glycine max
Glyma.20G152400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 39119600-39120599 Glycine max
Glyma.20G152400 2.0kb upstream 2.0kb upstream 4508 true Chr20: 39120600-39125107 Glycine max
Glyma.20G152400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 39123108-39125107 Glycine max
Glyma.20G152400 2.0kb downstream 2.0kb downstream 4508 true Chr20: 39118600-39123107 Glycine max
Glyma.20G152400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 39118600-39120599 Glycine max
Glyma.20G152400 5.0kb upstream 5.0kb upstream 7508 true Chr20: 39120600-39128107 Glycine max
Glyma.20G152400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 39123108-39128107 Glycine max
Glyma.20G152400 5.0kb downstream 5.0kb downstream 7508 true Chr20: 39115600-39123107 Glycine max
Glyma.20G152400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 39115600-39120599 Glycine max
Glyma.20G152400 10.0kb upstream 10.0kb upstream 12508 true Chr20: 39120600-39133107 Glycine max
Glyma.20G152400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 39123108-39133107 Glycine max
Glyma.20G152400 10.0kb downstream 10.0kb downstream 12508 true Chr20: 39110600-39123107 Glycine max
Glyma.20G152400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 39110600-39120599 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303473 5265 Fabidae View MSA
124050687 5270 Rosid View MSA
123742316 5271 Pentapetalae View MSA
122794738 5272 Eudicot View MSA
122048937 5273 Angiosperm View MSA
121351387 5274 Embryophyte View MSA
123382147 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.94263 0.0 6.43451    
cufflinks 4.87311 0.0 14.2115    
cufflinks 2.13028 0.0 6.94014    
cufflinks 7.586 0.0 21.0263   High
cufflinks 3.35754 0.0 10.305    
cufflinks 0.540543 0.0 1.99223   Low
cufflinks 4.77584 0.0 13.9378    
cufflinks 1.56879 0.0 5.32553    
cufflinks 8.0466 0.0 22.2181   High
cufflinks 6.34        
cufflinks 0.101       Low
cufflinks 2.425        
cufflinks 0.952        
cufflinks 0.131       Low
cufflinks 9.211     High High
cufflinks 5.694        
cufflinks 0.207        
cufflinks 6.594        
cufflinks 4.91        
cufflinks 5.326        
cufflinks 0.128       Low
cufflinks 5.593        
cufflinks 5.368        
cufflinks 0.03     Low Low
cufflinks 5.71        
cufflinks 0.223        

0 Strain