Gene : Glyma.20G182600 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR23315:SF111 - U-BOX DOMAIN-CONTAINING PROTEIN 14 Genomic Order:  1826
Name:  ? Glyma.20G182600 Secondary Identifier:  ? PAC:30521481
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G182600 0.5kb upstream 0.5kb upstream 4692 true Chr20: 42058882-42063573 Glycine max
Glyma.20G182600 0.5kb upstream 0.5kb upstream 500 false Chr20: 42058882-42059381 Glycine max
Glyma.20G182600 0.5kb downstream 0.5kb downstream 4692 true Chr20: 42059382-42064073 Glycine max
Glyma.20G182600 0.5kb downstream 0.5kb downstream 500 false Chr20: 42063574-42064073 Glycine max
Glyma.20G182600 1.0kb upstream 1.0kb upstream 5192 true Chr20: 42058382-42063573 Glycine max
Glyma.20G182600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 42058382-42059381 Glycine max
Glyma.20G182600 1.0kb downstream 1.0kb downstream 5192 true Chr20: 42059382-42064573 Glycine max
Glyma.20G182600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 42063574-42064573 Glycine max
Glyma.20G182600 2.0kb upstream 2.0kb upstream 6192 true Chr20: 42057382-42063573 Glycine max
Glyma.20G182600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 42057382-42059381 Glycine max
Glyma.20G182600 2.0kb downstream 2.0kb downstream 6192 true Chr20: 42059382-42065573 Glycine max
Glyma.20G182600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 42063574-42065573 Glycine max
Glyma.20G182600 5.0kb upstream 5.0kb upstream 9192 true Chr20: 42054382-42063573 Glycine max
Glyma.20G182600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 42054382-42059381 Glycine max
Glyma.20G182600 5.0kb downstream 5.0kb downstream 9192 true Chr20: 42059382-42068573 Glycine max
Glyma.20G182600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 42063574-42068573 Glycine max
Glyma.20G182600 10.0kb upstream 10.0kb upstream 14192 true Chr20: 42049382-42063573 Glycine max
Glyma.20G182600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 42049382-42059381 Glycine max
Glyma.20G182600 10.0kb downstream 10.0kb downstream 14192 true Chr20: 42059382-42073573 Glycine max
Glyma.20G182600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 42063574-42073573 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308231 5265 Fabidae View MSA
124065418 5270 Rosid View MSA
123739906 5271 Pentapetalae View MSA
122790994 5272 Eudicot View MSA
122042286 5273 Angiosperm View MSA
121349135 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.5104 0.0 30.7104    
cufflinks 6.14189 0.0 16.6762    
cufflinks 25.0787 0.0 69.5491 High High
cufflinks 8.11351 0.0 21.7414    
cufflinks 6.24555 0.0 16.9443    
cufflinks 21.8908 0.0 59.8707   High
cufflinks 4.91687 0.0 13.5761   Low
cufflinks 12.99 0.0 34.7079    
cufflinks 9.27408 0.0 24.7801    
cufflinks 6.628        
cufflinks 17.258     High High
cufflinks 9.64     High  
cufflinks 6.326        
cufflinks 2.528       Low
cufflinks 10.003     High  
cufflinks 6.725        
cufflinks 22.896     High High
cufflinks 5.087        
cufflinks 4.307       Low
cufflinks 5.853        
cufflinks 21.126     High High
cufflinks 6.758        
cufflinks 4.637        
cufflinks 17.271     High High
cufflinks 6.048        
cufflinks 21.222     High High

0 Strain