Gene : Glyma.20G183100 G. max Wm82.a2.v1
Defline:  (1 of 3) 1.1.5.3 - Glycerol-3-phosphate dehydrogenase / sn-glycerol-3-phosphate dehydrogenase Genomic Order:  1831
Name:  ? Glyma.20G183100 Secondary Identifier:  ? PAC:30520973
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-4261 Glycine max pathologic  
Gmax PWY-6118 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G183100 0.5kb upstream 0.5kb upstream 11511 true Chr20: 42112199-42123709 Glycine max
Glyma.20G183100 0.5kb upstream 0.5kb upstream 500 false Chr20: 42123210-42123709 Glycine max
Glyma.20G183100 0.5kb downstream 0.5kb downstream 11511 true Chr20: 42111699-42123209 Glycine max
Glyma.20G183100 0.5kb downstream 0.5kb downstream 500 false Chr20: 42111699-42112198 Glycine max
Glyma.20G183100 1.0kb upstream 1.0kb upstream 12011 true Chr20: 42112199-42124209 Glycine max
Glyma.20G183100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 42123210-42124209 Glycine max
Glyma.20G183100 1.0kb downstream 1.0kb downstream 12011 true Chr20: 42111199-42123209 Glycine max
Glyma.20G183100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 42111199-42112198 Glycine max
Glyma.20G183100 2.0kb upstream 2.0kb upstream 13011 true Chr20: 42112199-42125209 Glycine max
Glyma.20G183100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 42123210-42125209 Glycine max
Glyma.20G183100 2.0kb downstream 2.0kb downstream 13011 true Chr20: 42110199-42123209 Glycine max
Glyma.20G183100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 42110199-42112198 Glycine max
Glyma.20G183100 5.0kb upstream 5.0kb upstream 16011 true Chr20: 42112199-42128209 Glycine max
Glyma.20G183100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 42123210-42128209 Glycine max
Glyma.20G183100 5.0kb downstream 5.0kb downstream 16011 true Chr20: 42107199-42123209 Glycine max
Glyma.20G183100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 42107199-42112198 Glycine max
Glyma.20G183100 10.0kb upstream 10.0kb upstream 21011 true Chr20: 42112199-42133209 Glycine max
Glyma.20G183100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 42123210-42133209 Glycine max
Glyma.20G183100 10.0kb downstream 10.0kb downstream 21011 true Chr20: 42102199-42123209 Glycine max
Glyma.20G183100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 42102199-42112198 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297544 5265 Fabidae View MSA
124061929 5270 Rosid View MSA
123753233 5271 Pentapetalae View MSA
122790544 5272 Eudicot View MSA
122048322 5273 Angiosperm View MSA
121344080 5274 Embryophyte View MSA
123427532 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.55808 0.0 8.38584    
cufflinks 4.13592 0.0 16.2705   High
cufflinks 1.24885 0.0 7.21504    
cufflinks 1.0582 0.0 6.42922    
cufflinks 0.672601 0.0 3.95079   Low
cufflinks 3.35097 0.0 15.8045   High
cufflinks 2.18931 0.0 10.6079    
cufflinks 0.612015 0.0 3.63639   Low
cufflinks 0.763947 0.0 5.14125    
cufflinks 0.043     Low  
cufflinks 0.076        
cufflinks 0.118     Low  
cufflinks 0.067     Low  
cufflinks 0.023     Low Low
cufflinks 0.016     Low Low
cufflinks 0.059     Low  
cufflinks 0.124        
cufflinks 0.264       High
cufflinks 0.28       High
cufflinks 0.042     Low  
cufflinks 0.073        
cufflinks 0.042     Low  
cufflinks 0.08     Low  
cufflinks 0.095        
cufflinks 0.04     Low  
cufflinks 0.171       High

0 Strain