Gene : Glyma.20G184400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11071:SF200 - CYCLOPHILIN-LIKE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FAMILY PROTEIN-RELATED Genomic Order:  1844
Name:  ? Glyma.20G184400 Secondary Identifier:  ? PAC:30521437
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G184400 0.5kb upstream 0.5kb upstream 5788 true Chr20: 42259262-42265049 Glycine max
Glyma.20G184400 0.5kb upstream 0.5kb upstream 500 false Chr20: 42264550-42265049 Glycine max
Glyma.20G184400 0.5kb downstream 0.5kb downstream 5788 true Chr20: 42258762-42264549 Glycine max
Glyma.20G184400 0.5kb downstream 0.5kb downstream 500 false Chr20: 42258762-42259261 Glycine max
Glyma.20G184400 1.0kb upstream 1.0kb upstream 6288 true Chr20: 42259262-42265549 Glycine max
Glyma.20G184400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 42264550-42265549 Glycine max
Glyma.20G184400 1.0kb downstream 1.0kb downstream 6288 true Chr20: 42258262-42264549 Glycine max
Glyma.20G184400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 42258262-42259261 Glycine max
Glyma.20G184400 2.0kb upstream 2.0kb upstream 7288 true Chr20: 42259262-42266549 Glycine max
Glyma.20G184400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 42264550-42266549 Glycine max
Glyma.20G184400 2.0kb downstream 2.0kb downstream 7288 true Chr20: 42257262-42264549 Glycine max
Glyma.20G184400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 42257262-42259261 Glycine max
Glyma.20G184400 5.0kb upstream 5.0kb upstream 10288 true Chr20: 42259262-42269549 Glycine max
Glyma.20G184400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 42264550-42269549 Glycine max
Glyma.20G184400 5.0kb downstream 5.0kb downstream 10288 true Chr20: 42254262-42264549 Glycine max
Glyma.20G184400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 42254262-42259261 Glycine max
Glyma.20G184400 10.0kb upstream 10.0kb upstream 15288 true Chr20: 42259262-42274549 Glycine max
Glyma.20G184400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 42264550-42274549 Glycine max
Glyma.20G184400 10.0kb downstream 10.0kb downstream 15288 true Chr20: 42249262-42264549 Glycine max
Glyma.20G184400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 42249262-42259261 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301265 5265 Fabidae View MSA
124066155 5270 Rosid View MSA
123744610 5271 Pentapetalae View MSA
122791251 5272 Eudicot View MSA
122046189 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121350485 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.0289 0.0 65.3453   Low
cufflinks 16.4092 0.0 68.8683   Low
cufflinks 23.7348 0.0 97.0926 High  
cufflinks 26.4518 0.0 109.724 High  
cufflinks 28.7591 0.0 118.076 High  
cufflinks 35.1344 0.0 146.059 High High
cufflinks 27.7903 0.0 115.004 High  
cufflinks 27.0871 0.0 111.823 High  
cufflinks 26.794 0.0 109.926 High  
cufflinks 1.955        
cufflinks 1.664        
cufflinks 1.145        
cufflinks 2.392       High
cufflinks 3.163       High
cufflinks 1.538        
cufflinks 1.015       Low
cufflinks 1.194        
cufflinks 1.44        
cufflinks 1.276        
cufflinks 1.177        
cufflinks 1.719        
cufflinks 1.143        
cufflinks 1.12        
cufflinks 1.856        
cufflinks 1.113        
cufflinks 1.545        

0 Strain