Gene : Glyma.20G184600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33294:SF5 - AWPM-19-LIKE FAMILY PROTEIN Genomic Order:  1846
Name:  ? Glyma.20G184600 Secondary Identifier:  ? PAC:30522949
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G184600 0.5kb upstream 0.5kb upstream 1982 true Chr20: 42279513-42281494 Glycine max
Glyma.20G184600 0.5kb upstream 0.5kb upstream 500 false Chr20: 42280995-42281494 Glycine max
Glyma.20G184600 0.5kb downstream 0.5kb downstream 1982 true Chr20: 42279013-42280994 Glycine max
Glyma.20G184600 0.5kb downstream 0.5kb downstream 500 false Chr20: 42279013-42279512 Glycine max
Glyma.20G184600 1.0kb upstream 1.0kb upstream 2482 true Chr20: 42279513-42281994 Glycine max
Glyma.20G184600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 42280995-42281994 Glycine max
Glyma.20G184600 1.0kb downstream 1.0kb downstream 2482 true Chr20: 42278513-42280994 Glycine max
Glyma.20G184600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 42278513-42279512 Glycine max
Glyma.20G184600 2.0kb upstream 2.0kb upstream 3482 true Chr20: 42279513-42282994 Glycine max
Glyma.20G184600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 42280995-42282994 Glycine max
Glyma.20G184600 2.0kb downstream 2.0kb downstream 3482 true Chr20: 42277513-42280994 Glycine max
Glyma.20G184600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 42277513-42279512 Glycine max
Glyma.20G184600 5.0kb upstream 5.0kb upstream 6482 true Chr20: 42279513-42285994 Glycine max
Glyma.20G184600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 42280995-42285994 Glycine max
Glyma.20G184600 5.0kb downstream 5.0kb downstream 6482 true Chr20: 42274513-42280994 Glycine max
Glyma.20G184600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 42274513-42279512 Glycine max
Glyma.20G184600 10.0kb upstream 10.0kb upstream 11482 true Chr20: 42279513-42290994 Glycine max
Glyma.20G184600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 42280995-42290994 Glycine max
Glyma.20G184600 10.0kb downstream 10.0kb downstream 11482 true Chr20: 42269513-42280994 Glycine max
Glyma.20G184600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 42269513-42279512 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312985 5265 Fabidae View MSA
124066413 5270 Rosid View MSA
123736675 5271 Pentapetalae View MSA
122790401 5272 Eudicot View MSA
122044376 5273 Angiosperm View MSA
121349282 5274 Embryophyte View MSA
123381254 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0271394 0.0 0.123078 Low  
cufflinks 0.016983 0.0 0.0803507 Low Low
cufflinks 0.0745279 0.0 0.310441 Low  
cufflinks 0.677275 0.0 2.56315    
cufflinks 1.74065 0.0 6.26781   High
cufflinks 4.42716 0.0 14.5675   High
cufflinks 0.0275915 0.0 0.124878 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low  
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain